Job Description P39285 Confidence 22.75% Date Thu Jan 5 11:58:57 GMT 2012 Rank 349 Aligned Residues 95 % Identity 14% Template c1vdxA_ PDB info PDB header:ligase Chain: A: PDB Molecule:hypothetical protein ph0099; PDBTitle: crystal structure of a pyrococcus horikoshii protein with2 similarities to 2'5' rna-ligase Resolution 2.40 Å

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		980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	W	S	L	S	D	S	V	T	R	V	V	L	T	I	P	A	P	A	D	A	N	S	E	E	V	T	E	I	L	L	T	A	A	R	R	C	S	L	V	I	D	N	P	A	P	E	V	F	L	V	D	L	Q	Q	G	I	Q	I	F	E	L	R	I	Y	A	A	E	M	G	H	R	M	P	L	R	H	E	I
Query Conservation
Alig confidence																																							.	.	.	.	.	.																															.
Template Conservation																																							.	.	.	.	.	.																															.
Template Sequence		I	K	F	V	E	R	E	N	L	H	I	T	L	K	F	L	G	E	I	T	E	E	Q	A	E	E	I	K	N	I	L	K	K	I	A	E	K	.	.	.	.	.	.	Y	K	K	H	E	V	K	V	K	G	I	G	V	F	P	N	P	N	Y	I	R	V	I	W	A	G	I	E	N	D	.	E	I	I	R	E	M
Template Known Secondary structure							G	G	G																												T	T	.	.	.	.	.	.	S	B															S	S	S												.
Template Predicted Secondary structure																																							.	.	.	.	.	.																															.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.
		1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.				.	.	.	.	.	1080	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		H	Q	L	I	L	A	G	F	H	A	H	G	I	D	M	.	.	.	P	F	P	P	F	Q	M
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		A	R	E	I	E	D	E	L	A	K	L	G	F	K	K	E	G	N	F	V	A	H	I	T	L
Template Known Secondary structure											T	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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