Job Description P39285 Confidence 37.49% Date Thu Jan 5 11:58:57 GMT 2012 Rank 186 Aligned Residues 206 % Identity 13% Template c1s35A_ PDB info PDB header:structural protein Chain: A: PDB Molecule:spectrin beta chain, erythrocyte; PDBTitle: crystal structure of repeats 8 and 9 of human erythroid2 spectrin Resolution 2.40 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	E	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V	S	P	G	M	S	T	D	A	L
Query Conservation
Alig confidence																								.																																																	.	.	.	.
Template Conservation																								.																																																	.	.	.	.
Template Sequence		A	F	L	Q	D	L	D	D	F	Q	A	W	L	S	I	T	Q	K	A	V	A	S	.	E	D	M	P	E	S	L	P	E	A	E	Q	L	L	Q	Q	H	A	G	I	K	D	E	I	D	G	H	Q	D	S	Y	Q	R	V	K	E	S	G	E	K	V	I	Q	G	Q	T	D	P	.	.	.	.	E	Y	L	L	L
Template Known Secondary structure																								.					S	S																																					T	T			S		.	.	.	.
Template Predicted Secondary structure																								.																																																	.	.	.	.
Template SS confidence
		1065	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.		.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.					.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		N	Q	E	I	L	Q	V	S	S	Q	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	.	.	G	N	T	P	L	N	Q	A	Q	N	F	A	L	Q	S	D	S	A	R	L	K
Query Conservation																																																											.	.
Alig confidence																														.																													.	.
Template Conservation																														.
Template Sequence		G	Q	R	L	E	G	L	D	T	G	W	D	A	L	G	R	M	W	E	S	R	S	H	T	L	A	Q	C	.	L	G	F	Q	E	F	Q	K	D	A	K	Q	A	E	A	I	L	S	N	Q	E	Y	T	L	A	H	L	E	P	P	D	S	L	E	A	A	E	A	G	I	R	K	F	E	D	F	L	G	S	M	E
Template Known Secondary structure																														.																															S	S
Template Predicted Secondary structure																														.
Template SS confidence
		1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.		.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A	L	R	N	Q	L	N	S	Q	R	Q	L	E	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	R	D	K	V	L	S	P	V	D	S	G	N	K	L	V	A	E	G	N	L	Y	S	D	K	I	K	E	K	V	Q	L	I	E	D	R	H	R	K	N	N	E	K	A	Q	E	A	S	V	L	L	R	D
Template Known Secondary structure																				T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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