Job Description P39285 Confidence 42.94% Date Thu Jan 5 11:58:57 GMT 2012 Rank 145 Aligned Residues 208 % Identity 13% Template c1qu7A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:methyl-accepting chemotaxis protein i; PDBTitle: four helical-bundle structure of the cytoplasmic domain of a serine2 chemotaxis receptor Resolution 2.60 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	Q	I	T	Q	E	L	E	Q	A	K	A	A	K	P	A	Q	P	E	V	V	E	A	L	Q	S	A	L	N	A	L	E	E	.	R	K	G	S	L	E	R	I	K	Q	Y	Q	Q	V	I	D	N	Y	P	K	L	S	A	T	L	R	A	Q	L	N	N	M	R	D	E	P	R	S	V	S	P	G	M	S	T	D
Query Conservation																																			.
Alig confidence																																			.
Template Conservation
Template Sequence		E	Q	Q	A	A	S	L	E	Q	T	A	A	S	M	E	Q	L	T	A	T	V	K	Q	N	A	E	N	A	R	Q	A	S	H	L	A	L	S	A	S	E	T	A	Q	R	G	G	K	V	V	D	N	V	V	Q	T	M	R	D	I	S	T	S	S	Q	K	I	A	D	I	I	S	V	I	D	G	I	A	F	Q	T
Template Known Secondary structure																																			S	T	T																														T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.													.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	L	N	Q	E	I	L	Q	V	S	S	Q	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	K	S	R	Q	A	Q	Q	E	Q	E	R	A	R	E	I	A	D	S	L	N	Q	L	P	Q	Q	Q	T	D	A	R	R	Q	L	N	E	I	E	R	R	L	G	T	L	T	G	N	T	P	L	N	Q	A	Q
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	I	L	A	L	N	A	A	V	E	A	A	R	A	G	E	Q	G	R	G	F	A	V	V	A	G	E	V	R	N	L	A	Q	R	S	A	Q	A	A	R	E	I	K	S	L	I	E	D	S	V	G	K	V	D	V	G	S	T	L	V	E	S	A	G	E	T	M	A	E	I	V	S	A	V	T	R	V	T	D	I
Template Known Secondary structure															T	G	G	G																																															T	T									T	T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	A	L	Q	S	D	S	A	R	L	K	A	L	V	D	E	L	E	L	A	Q	L	S	A	N	N	R	Q	E	L	A	R	L	R	S	E	L	A	E	K	E	S	Q	Q	L	D	A	Y	L	Q	A	L	R	N	Q	L	N	S	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	E	I	A	S	A	S	D	E	Q	S	R	G	I	D	Q	V	G	L	A	V	A	E	M	D	R	V	T	Q	Q	N	A	A	L	V	E	Q	S	A	A	A	A	A	A	L	E	E	Q	A	S	R	L	T	E	A	V	A	V	F	R
Template Known Secondary structure																																																														T
Template Predicted Secondary structure
Template SS confidence
		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions