 |
| Job Description | P39285 | | Confidence | 53.29% | Date | Thu Jan 5 11:58:57 GMT 2012 |
| Rank | 105 | Aligned Residues | 62 |
| % Identity | 18% | Template | c1q46A_ |
| PDB info |
PDB header:translation | Chain: A: PDB Molecule:translation initiation factor 2 alpha subunit; |
PDBTitle: crystal structure of the eif2 alpha subunit from2 saccharomyces cerevisia
|
| Resolution | 2.86 Å |
|
| | |
929 | 930 | . | . | . | . | |
. | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | |
|
. | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 | . | |
|
|
|
. | . | . | . | . | . | . | . | 990 | . | . | . | . | . |
| Predicted Secondary structure | |
 | | |
|
|
| . |
|
|
|
|  | | |  |
|
| | | | | | | | | | | | . | . | | | | | |
|
|
|
|
| | | | | |
| | | |
|
|
|
| | | | . | . | . | . | | |
|
|
|
| | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
L | F | E | K | P | I | . |
R | I | G | D | T | V | T | I | R | D | L | T | G | S | V | T | K | I | N | T | R | . |
. |
A | T | T | I | S | D | W | D | R | K | E | I | I | V | P | N | K | A | F | I | T | E | Q | F | I | N | . |
. |
. |
. |
W | S | L | S | D | S | V | T | R | V | V | L | T | I |
| Query Conservation | |
| |
| |
| | . | | |
|
| |
| | | | | | |
| |
| | |
| | |
| . | . | |
| |
| | | |
| | | | | |
|
|
| | | | | | | | | |
| . | . | . | . | |
| | | | | | |
| | | | | |
| Alig confidence | |
|
|
|
|
|
| . |
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| | | |
|
| |
| |
|
| | . | . | . | . | . |
| |
| | |
| | | |
| |
|
| |
| |
|
| |
|
|
|
| |
| | |
|
|
|
| | | |
| | | | | | | | |
|
| | |
| | |
|
|
| |
|
| Template Sequence | |
F | Y | E | N | K | Y | P | E | I | D | D | I | V | M | . |
. |
. |
. |
. |
V | N | V | Q | Q | I | A | E | M | G | A | Y | V | K | L | L | E | Y | D | N | I | E | G | M | I | L | L | S | E | L | S | R | R | R | I | R | S | I | Q | K | L | I | R | V | G | K | N | D | V | A | V | V | L | R | V |
| Template Known Secondary structure | |
S | S | S | S | S | S |
|
| T | T |
| | | | . | . | . | . | . | | | | | | |
| S | S | | | | | | | T | T | T | T | T | | | | | | | G | G | G | T |
| S | S |
|
| S | S | G | G | G | T | S |
| T | T |
| | | | | | | | | |
| Template Predicted Secondary structure | |
| | | | |
|
|
|
|
|
| | | | . | . | . | . | . | | | | | | | |
|
|
| | | | | | |
|
|
|
| | | | | | | | | |
|
|
|
|
|
|
|
| | | | | |
|
|
|
| | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
