Return to main results Retrieve Phyre Job Id

Job DescriptionP39285
Confidence95.27%DateThu Jan 5 11:58:57 GMT 2012
Rank26Aligned Residues153
% Identity4%Templatec1jchC_
PDB info PDB header:ribosome inhibitor, hydrolaseChain: C: PDB Molecule:colicin e3; PDBTitle: crystal structure of colicin e3 in complex with its immunity protein
Resolution3.02 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   37..40.........50.........60.........70.........80.........90.........100... ......110....
Predicted Secondary structure  ..
Query SS confidence 


































































. .










Query Sequence  AAKPAQPEVVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMST. . DALNQEILQVS
Query Conservation      
    

 
   
  
 
     
   


  
     

  

 

  
  
       
  ..  
 
    
 
Alig confidence 


































































..










Template Conservation     
    
     

    
     
 


    

                          
              
 
Template Sequence  DQVKQRQDEENRRQQEWDATHPVEAAERNYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAANKTLADAIAEIK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 















































































   294.....300.........310.........320.........330.........340.........350.........360.........370...
 
   115....120.........130.........140.........150.........160.........170.........180.........
Predicted Secondary structure 
Query SS confidence 










































































Query Sequence  SQLLDKSRQAQQEQERAREIADSLNQLPQQQTDARRQLNEIERRLGTLTGNTPLNQAQNFALQSDSARLKALVDE
Query Conservation    
     
         

   
  
      
  

 


  
  
       
     
      
     
Alig confidence 










































































Template Conservation                                                     
    
     
      
  
  
Template Sequence  QFNRFAHDPMAGGHRMWQMAGLKAQRAQTDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRSAENNLND
Template Known Secondary structure  TTGGGTT
SSSSTTTT
Template Predicted Secondary structure 
Template SS confidence 










































































   374.....380.........390.........400.........410.........420.........430.........440........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions