 |
Job Description | P39285 | Confidence | 94.48% | Date | Thu Jan 5 11:58:57 GMT 2012 |
Rank | 33 | Aligned Residues | 106 |
% Identity | 5% | Template | c1deqF_ |
PDB info |
PDB header: | PDB COMPND: | |
Resolution | UNK |
|
 |
  |   |
62 | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | |
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | L | E | R | I | K | Q | Y | Q | Q | V | I | D | N | Y | P | K | L | S | A | T | L | R | A | Q | L | N | N | M | R | D | E | P | R | S | V | S | P | G | M | S | T | . |
. |
D | A | L | N | Q | E | I | L | Q | V | S | S | Q | L | L | D | K | S | R | Q | A | Q | Q | E | Q | E | R | A | R | E | I | A | D | S | L | N |
Query Conservation |   |
  |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   | . | . |   |   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|   |   |
|
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
L | N | N | Y | Q | T | S | V | D | K | D | L | R | T | L | E | G | I | L | Y | Q | V | E | N | K | T | S | E | A | R | E | L | V | K | A | I | Q | I | S | Y | N | P | D | Q | P | S | K | P | N | N | I | E | S | A | T | K | N | S | K | S | M | M | E | E | I | M | K | Y | E | T | L | I | S | T | H | E | S | T | I | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | B | T | T | B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
29 | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
  |
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | L | P | Q | Q | Q | T | D | A | R | R | Q | L | N | E | I | E | R | R | L | G | T | L | T | G | N | T | P |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |
|
Template Sequence |   |
F | L | Q | E | I | Y | N | S | N | S | Q | K | I | V | N | L | R | D | K | V | V | Q | L | E | A | N | C | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|