Job Description P76417 Confidence 100.00% Date Thu Jan 5 12:22:51 GMT 2012 Rank 2 Aligned Residues 394 % Identity 14% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		L	S	F	M	M	F	V	E	W	F	I	W	G	A	W	F	V	P	L	W	L	W	L	S	K	S	G	F	S	A	G	E	I	G	W	S	Y	A	C	T	A	I	A	A	I	L	S	P	I	L	V	G	S	I	T	D	R	F	F	S	A	Q	K	V	L	A	V	L	M	F	A	G	A	L	L	M	Y	F	.	.
Query Conservation																																																																																.	.
Alig confidence																						.																																																										.	.
Template Conservation																						.
Template Sequence		I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	.	Y	L	V	E	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N	P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F
Template Known Secondary structure														T	S							.		T	T	S	S	T	T		S	S																											S
Template Predicted Secondary structure																						.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
			85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	A	Q	Q	T	T	F	A	G	F	F	P	L	L	L	A	Y	S	L	T	Y	M	P	T	I	A	L	T	N	S	I	A	F	A	N	V	P	D	V	E	R	D	F	P	R	I	R	V	M	G	T	I	G	W	I	A	S	G	L	A	C	G	F	L	P	Q	I	L	G	Y	A	D	I	S	P	T	N	I	P
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		V	P	W	A	T	S	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V	G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M
Template Known Secondary structure							S	S	S	S																T										T	T		T	T	T																		T	S												T			S	T	T		T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.						.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		L	L	I	T	A	G	S	S	A	L	L	G	V	F	A	F	F	L	P	D	T	P	P	K	S	T	G	K	M	D	I	K	V	M	L	G	L	D	A	L	I	L	L	R	D	K	N	F	L	V	F	F	F	C	S	F	L	F	A	M	P	L	A	F	Y	Y	I	F	A	.	.	.	.	.	N	G	Y	L	T	E
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.
Template Conservation
Template Sequence		P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I	A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H
Template Known Secondary structure																				S	S	T	T	T				S		T	T	T						T							T	S	S																													B	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	M	K	N	A	T	G	W	M	T	L	G	Q	F	S	E	I	F	F	M	L	A	L	P	F	F	T	K	R	F	G	I	K	K	V	L	L	L	G	L	V	T	A	A	I	R	Y	G	F	F	I	Y	G	S	A	D	E	Y	F	T	Y	A	L	L	F	L	G	I	L	L	H	G	V	S	Y	D	F	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W	M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V
Template Known Secondary structure																																T	S	T	T																				T	T	S			T	T																	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	A	Y	I	Y	V	D	K	K	A	P	V	H	M	R	T	A	A	Q	G	L	I	T	L	C	C	Q	G	F	G	S	L	L	G	Y	R	L	G	G	V	M	M	E	K	M	F	A	Y	Q	E	P	V	N	G	L	T	F	N	W	S	G	M	W	T	F	G	A	V	M	I	A	I	I	A	V	L	F	M	I
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	.	.	.	.	.	.	.	.	.	.	.	.	G	W	D	G	G	F	M	V	M	I	G	G	S	I	L	A	V	I	L	L	I	V
Template Known Secondary structure											T	S		T	T																															S	S	.	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.													.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		399	400	.	.	.	.	.	.	.	.	.	410	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	R	E	S	D	N	E	I	T	A	I	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	M	I	G	E	K	R	R	H	E	Q	L	L	Q	E
Template Known Secondary structure												G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions