Job Description P76417 Confidence 31.07% Date Thu Jan 5 12:22:51 GMT 2012 Rank 8 Aligned Residues 216 % Identity 9% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	D	A	L	I	L	L	R	D	K	N	F	L	V	F	F	F	C	S	F	L	F	A	M	P	L	A	F	Y	Y	I	F	A	N	G	Y	L	T	E	V	G	M	K	N	A	T	G	W	M	T	L	G	Q	F	S	E	I	F	F	M	L	A	L	P	F	F	T	K	R	F	G	I	K	K	V	L	L	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T	S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V
Template Known Secondary structure			T	T	G	G	G	G	T	T	T	S	S																								T	T	T	T		S	S																													T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		279	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	V	T	A	A	I	R	Y	G	F	F	I	Y	.	G	S	A	D	E	Y	F	T	Y	A	L	L	F	L	G	I	L	L	H	G	V	S	Y	D	F	Y	Y	V	T	A	Y	I	Y	V	D	K	K	A	P	V	H	M	R	T	A	A	Q	G	L	I	T	L	C	C	Q	G	F	G	S	L	L	G	Y	R	L	G
Query Conservation															.
Alig confidence															.																																																			.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.
Template Sequence		H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C	G	I	N	N	L	H	.	.	.	.	.	G	I	P	G	I	I	G	G	I	V	G
Template Known Secondary structure						G	G	G						T	T	T	T	T	T	T		S																																				T	T						T	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.				.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		G	V	M	M	E	K	M	F	A	Y	Q	E	P	V	N	G	L	T	F	N	W	S	G	M	W	T	F	G	A	V	M	I	A	I	I	A	V	L	F	M	I	F	F	R	E	S	D	N	.	.	.	E	I	T	A	I	K	V	D	D	R	D	I	A	L	T	Q	G	E
Query Conservation																																																		.	.	.
Alig confidence																							.	.	.	.																								.	.	.
Template Conservation																							.	.	.	.
Template Sequence		A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	.	.	.	.	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E	G	N
Template Known Secondary structure																							.	.	.	.																			T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T	T	T
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions