 |
Job Description | P0CG19 | Confidence | 99.97% | Date | Thu Jan 5 11:31:53 GMT 2012 |
Rank | 34 | Aligned Residues | 132 |
% Identity | 20% | Template | d1e3ha3 |
SCOP info | Ribosomal protein S5 domain 2-like
| Ribosomal protein S5 domain 2-like
| Ribonuclease PH domain 1-like
|
Resolution | 2.6 |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
|
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | R | P | V | T | L | T | R | N | Y | T | K | H | A | E | G | S | V | L | V | E | F | G | D | T | K | V | L | C | T | A | S | I | E | . |
. |
. |
. |
E | G | V | P | R | F | L | K | G | Q | G | Q | G | W | I | T | A | E | Y | G | M | L | P | R | S | T | H | T | R | N | A | R | E | A | A | K | G | K | Q | G | G |
Query Conservation |   |
|   |
|   |
|   |
|   |   |
|   |
|   |   |
|   |
|
|
|   |
|   |   |
|   |
|   |
|
|   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |
|   |   |
|
|   |   |   |
|   |
|
|
|   |   |   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |
Template Sequence |   |
D | I | R | T | L | A | A | E | V | E | A | I | P | R | V | H | G | S | A | L | F | E | R | G | E | T | Q | I | L | G | V | T | T | L | N | X | L | R | X | E | Q | Q | L | D | T | L | S | P | V | T | R | K | R | Y | X | H | N | Y | N | F | P | P | Y | S | V | G | E | T | G | R | V | . |
. |
. |
. |
G | S | P | K | R |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
| S | S | S | S | S |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  | G | G | G | S |  |  |
|
| S | S | S | S |
|
|  |  | S |  |  |  |  |  |  |
|
| G | G | G | G | T |
|
|
|
|
| . | . | . | . | S | S |
|
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
347 | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | |
|
|
|
. | . | 420 | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | M | E | I | Q | R | L | I | A | R | A | L | R | A | A | V | D | L | K | A | L | G | E | F | T | I | T | L | D | C | D | V | L | Q | A | D | G | G | T | R | T | A | S | I | T | G | A | C | V | A | L | V | D | A | L | Q | K | L | V | E | N | G | K | L | K | T | N | P | M | K |
Query Conservation |   |
  |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|   |
|   |
|
|   |   |
|
|   |   |   |   |
|   |
|   |
|
|   |
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template Sequence |   |
R | E | I | G | H | G | A | L | A | E | R | A | I | V | P | V | L | P | T | R | E | E | F | P | Y | A | I | R | Q | V | S | E | A | L | G | S | N | G | S | T | S | X | G | S | V | C | A | S | T | X | S | L | L | N | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | P | L | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
|
|
| T | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | T |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
423 | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 480 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|