Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 5 Aligned Residues 221 % Identity 26% Template c2pnzB_ PDB info PDB header:hydrolase/hydrolase Chain: B: PDB Molecule:probable exosome complex exonuclease 2; PDBTitle: crystal structure of the p. abyssi exosome rnase ph ring2 complexed with udp and gmp Resolution 2.14 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	P	A	G	R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A	K
Query Conservation
Alig confidence																																																		.																											.	.	.	.	.
Template Conservation																																																		.																											.	.	.	.	.
Template Sequence		K	R	I	D	D	R	G	F	E	D	Y	R	P	I	E	I	E	V	G	V	I	E	K	A	E	G	S	A	L	V	K	L	G	S	T	Q	V	L	V	G	I	K	T	S	L	G	E	P	.	F	P	D	T	P	N	M	G	V	M	T	T	N	V	E	L	V	P	L	A	S	P	T	F	E	P	.	.	.	.	.
Template Known Secondary structure				T	T	S			T	T										S		S	S	S	S	S								T	T															.		T	T		T	T	S											G	G	G		T	T			S	.	.	.	.	.
Template Predicted Secondary structure																																																		.																											.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		G	K	Q	G	G	R	T	M	E	I	Q	R	L	I	A	R	A	L	R	A	A	.	.	.	.	.	.	.	.	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	P	D	E	R	A	I	E	L	A	R	V	I	D	R	G	I	R	E	S	K	A	L	N	L	E	K	M	V	I	V	P	G	K	I	V	R	V	V	F	I	D	V	H	V	L	D	H	D	G	N	L	M	D	A	I	G	I	A	A	I	A	A	L	L	N	A	R	V	P	K	V	R	Y	N	E	E	T	G
Template Known Secondary structure		S	S																			T	T	S	B		G	G	G	G				T	T	T															S	S																										T	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		153											.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.
Query Sequence		N	.	.	.	.	.	.	.	.	.	.	P	M	K	G	M	V	A	A	V	S	V	G	I	V	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R
Query Conservation			.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.																																																				.
Template Conservation																																																																.
Template Sequence		E	V	E	T	L	D	E	T	E	P	L	P	V	E	K	I	P	V	P	V	T	F	A	K	I	G	N	I	L	V	V	D	P	S	L	D	E	E	L	V	M	D	G	K	I	T	I	T	T	D	E	T	G	H	I	S	A	V	Q	K	S	E	.	G	G	A	F	K	L	E	E	V	M	Y	A	V	E	T	A	F
Template Known Secondary structure														B													T	T					S							T	T		S									T	T	S									S	.	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		223	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	N	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	K	A	E	E	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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