Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 22 Aligned Residues 198 % Identity 25% Template c2nn6F_ PDB info PDB header:hydrolase/transferase Chain: F: PDB Molecule:exosome component 6; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A	K	G	K	Q	G	G
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																									.	.	.	.	.
Template Sequence		R	D	P	T	R	L	R	P	V	Y	A	R	A	G	L	L	S	Q	A	K	G	S	A	Y	L	E	A	G	G	T	K	V	L	C	A	V	S	G	P	.	.	.	.	.	.	.	R	Q	A	L	R	G	R	L	L	C	D	F	R	R	A	P	F	A	G	R	R	R	R	A	.	.	.	.	.	P	P	G	G	C
Template Known Secondary structure				S	S										S			S	S	S	S							S	S	S											.	.	.	.	.	.	.					B											T	T	S	S	S	S				.	.	.	.	.	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																									.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.						.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	M	E	I	Q	R	L	I	A	R	A	L	R	A	A	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T	N	P	M	K	G	M	V	A	A	V	S	V	G
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	E	R	E	L	A	L	A	L	Q	E	A	L	E	P	A	V	R	L	G	R	Y	P	R	A	Q	L	E	V	S	A	L	L	L	E	D	G	G	S	A	L	A	A	A	L	T	A	A	A	L	A	L	A	D	A	.	.	.	.	.	.	.	.	.	.	.	G	V	E	M	Y	D	L	V	V	G	C	G	L	S
Template Known Secondary structure															T	T	T	B		S	T	T	S	B	T														S	S																	.	.	.	.	.	.	.	.	.	.	.				B	S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.												.	.	.	.	.	.	.	180	.	.	.	.	.	.
		166	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.																												.
Query SS confidence				.	.	.																												.
Query Sequence		I	V	.	.	.	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	E	D	.	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R	G	E	S	N	P	L
Query Conservation				.	.	.																												.
Alig confidence				.	.	.																												.											.	.
Template Conservation																																													.	.
Template Sequence		L	A	P	G	P	A	P	T	W	L	L	D	P	T	R	L	E	E	E	R	A	A	A	G	L	T	V	A	L	M	P	V	L	N	Q	V	A	G	L	L	G	S	G	.	.	E	G	G	L	T	E	S	W	A	E	A	V	R	L	G	L	E	G	C	Q	R	L
Template Known Secondary structure				S		S	S					S	S			T	T	T	G	G	G		S	S								T	T	T	T										.	.		S	S		T	T	T	T
Template Predicted Secondary structure																																													.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions