Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 14 Aligned Residues 221 % Identity 17% Template c2nn6E_ PDB info PDB header:hydrolase/transferase Chain: E: PDB Molecule:exosome complex exonuclease rrp42; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	P	A	G	R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A	K
Query Conservation
Alig confidence																																																		.																											.	.	.	.	.
Template Conservation																																																		.																											.	.	.	.	.
Template Sequence		L	R	V	D	G	R	G	C	E	D	Y	R	C	V	E	V	E	T	D	V	V	S	N	T	S	G	S	A	R	V	K	L	G	H	T	D	I	L	V	G	V	K	A	E	M	G	T	P	.	K	L	E	K	P	N	E	G	Y	L	E	F	F	V	D	C	S	A	S	A	T	P	E	F	E	G	.	.	.	.	.
Template Known Secondary structure				S	S	S			S	S													T	T	S	S	S							T	T												S			.		S	S	S		S	S											T	T	T		S	S			T	.	.	.	.	.
Template Predicted Secondary structure																																																		.																											.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.									.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Query Sequence		G	K	Q	G	G	R	T	M	E	I	Q	R	L	I	A	R	A	L	.	.	.	.	.	.	.	.	R	A	A	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	.	.	.	.	.	.	.
Query Conservation																				.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	G	D	D	L	G	T	E	I	A	N	T	L	Y	R	I	F	N	N	K	S	S	V	D	L	K	T	L	C	I	S	P	R	E	H	C	W	V	L	Y	V	D	V	L	L	L	E	C	G	G	N	L	F	D	A	I	S	I	A	V	K	A	A	L	F	N	T	R	I	P	R	V	R	V	L	E	D	I	E
Template Known Secondary structure		T	S	T																		S			S		S	S	S	S		S	S	T	T	T																S	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
					146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	E	N	G	K	L	K	T	N	P	M	K	G	M	V	A	A	V	S	V	G	I	V	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R
Query Conservation		.	.	.
Alig confidence		.	.	.																																																												.
Template Conservation																																																																.
Template Sequence		L	S	D	D	P	Y	D	C	I	R	L	S	V	E	N	V	P	C	I	V	T	L	C	K	I	G	Y	R	H	V	V	D	A	T	L	Q	E	E	A	C	S	L	A	S	L	L	V	S	V	T	S	K	G	V	V	T	C	M	R	K	V	G	.	K	G	S	L	D	P	E	S	I	F	E	M	M	E	T	G	K
Template Known Secondary structure					S	S				S					T	T										S	S	S	S			S	S							T	S		S									S	S	S				S						.	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		223	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	S	N	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	G	K	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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