Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 23 Aligned Residues 186 % Identity 22% Template c2nn6D_ PDB info PDB header:hydrolase/transferase Chain: D: PDB Molecule:exosome complex exonuclease rrp46; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A	K	G	K	Q	G	G	R	T	M	E
Query Conservation
Alig confidence																																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	R	H	F	A	C	E	Q	N	L	L	S	R	P	D	G	S	A	S	F	L	Q	G	D	T	S	V	L	A	G	V	Y	G	P	A	.	.	.	.	.	.	E	V	K	N	K	A	T	L	E	V	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	K	I	G	L	P	G	V	A	E	K	S
Template Known Secondary structure											S			S	S	S	S								T	T												.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.			S	S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.														.	.	.	.	.	80	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		I	Q	R	L	I	A	R	A	L	R	A	A	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T	N	P	M	K	G	M	V	A	A	V	S	V	G	I	V	.	N
Query Conservation																																																																																.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	E	R	L	I	R	N	T	C	E	A	V	V	L	G	T	L	H	P	R	T	S	I	T	V	V	L	Q	V	V	S	D	A	G	S	L	L	A	C	C	L	N	A	A	C	M	A	L	V	D	A	.	.	.	.	.	.	.	.	.	.	.	G	V	P	M	R	A	L	F	C	G	V	A	C	A	L	D	S	D
Template Known Secondary structure															G	G	G		S	S	S													S	S																	T	.	.	.	.	.	.	.	.	.	.	.	T				S	S											T	T
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.												.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	.	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R	G	E	S	N	P	L
Query Conservation																										.
Alig confidence																										.														.	.	.
Template Conservation																																								.	.	.
Template Sequence		G	T	L	V	L	D	P	T	S	K	Q	E	K	E	A	R	A	V	L	T	F	A	L	D	S	V	E	R	K	L	L	M	S	S	T	K	G	L	.	.	.	Y	S	D	T	E	L	Q	Q	C	L	A	A	A	Q	A	A	S	Q	H	V
Template Known Secondary structure							S										S									T	T	T											S	.	.	.
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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