Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 9 Aligned Residues 210 % Identity 26% Template c2nn6B_ PDB info PDB header:hydrolase/transferase Chain: B: PDB Molecule:exosome complex exonuclease rrp41; PDBTitle: structure of the human rna exosome composed of rrp41, rrp45,2 rrp46, rrp43, mtr3, rrp42, csl4, rrp4, and rrp40 Resolution 3.35 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		M	R	P	A	G	R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	.	.	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A
Query Conservation																																																	.	.
Alig confidence																																																	.	.																														.	.
Template Conservation																																																																																.	.
Template Sequence		Y	R	V	D	G	R	R	A	G	E	L	R	K	I	Q	A	R	M	G	V	F	A	Q	A	D	G	S	A	Y	I	E	Q	G	N	T	K	A	L	A	V	V	Y	G	P	H	E	I	R	G	S	R	A	R	A	L	P	D	R	A	L	V	N	C	Q	Y	S	S	A	T	F	S	T	G	E	R	K	R	R	.	.
Template Known Secondary structure		B		S	S	S	S		T	T	S									S		S	S	S	S	S								S	S															S	S	S						S	S											T	T	T	S	S	S				T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	K	Q	G	G	R	T	M	E	I	Q	R	L	I	A	R	A	L	R	A	A	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T	N	P	M	K	G	M
Query Conservation
Alig confidence		.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	H	G	D	R	K	S	C	E	M	G	L	Q	L	R	Q	T	F	E	A	A	I	L	T	Q	L	H	P	R	S	Q	I	D	I	Y	V	Q	V	L	Q	A	D	G	G	T	Y	A	A	C	V	N	A	A	T	L	A	V	L	D	A	.	.	.	.	.	.	.	.	.	.	.	G	I	P	M	R	D	F
Template Known Secondary structure		.	.	T	T	S	T																	T	T		G	G	G		T	T														S																	T	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure		.	.																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.												.	150	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	A	A	V	S	V	G	I	V	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	.	T	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R	G	E	S	N	P	L
Query Conservation																																			.
Alig confidence																																			.															.	.	.
Template Conservation																																																		.	.	.
Template Sequence		V	C	A	C	S	A	G	F	V	D	G	T	A	L	A	D	L	S	H	V	E	E	A	A	G	G	P	Q	L	A	L	A	L	L	P	A	S	G	Q	I	A	L	L	E	M	D	A	R	.	.	.	L	H	E	D	H	L	E	R	V	L	E	A	A	A	Q	A	A	R	D	V
Template Known Secondary structure											T	T					S							T	S	S										T	T	T	T									S		.	.	.			T	T	S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.				.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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