Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 8 Aligned Residues 209 % Identity 30% Template c2c37L_ PDB info PDB header:hydrolase Chain: L: PDB Molecule:probable exosome complex exonuclease 1; PDBTitle: rnase ph core of the archaeal exosome in complex with u82 rna Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		M	R	P	A	G	R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	.	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A
Query Conservation																																																	.
Alig confidence																																																	.																													.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		K	R	T	D	G	R	K	P	D	E	L	R	S	I	K	I	E	L	G	V	L	K	N	A	D	G	S	A	I	F	E	M	G	N	T	K	A	I	A	A	V	Y	G	P	K	E	M	H	P	R	H	L	S	L	P	D	R	A	V	L	R	V	R	Y	H	M	T	P	F	S	T	D	E	R	K	N	.	.	.	.
Template Known Secondary structure			B	T	T	S			T	T	B												T	T	S	S								T	T														S	S	G	G	G	S		S	S	S											T	T	S	S	S	S				.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	K	Q	G	G	R	T	M	E	I	Q	R	L	I	A	R	A	L	R	A	A	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T	N	P	M	K	G	M	V
Query Conservation
Alig confidence		.																																																													.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	P	A	P	S	R	R	E	I	E	L	S	K	V	I	R	E	A	L	E	S	A	V	L	V	E	L	F	P	R	T	A	I	D	V	F	T	E	I	L	Q	A	D	A	G	S	R	L	V	S	L	M	A	A	S	L	A	L	A	D	A	.	.	.	.	.	.	.	.	.	.	.	G	I	P	M	R	D	L	I
Template Known Secondary structure		.	S	S																		T	T	B		G	G	G	S	T	T													S	S																	T	.	.	.	.	.	.	.	.	.	.	.	T			B	S	S
Template Predicted Secondary structure		.																																																													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.												.	.	.	.	.	.	160	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		A	A	V	S	V	G	I	V	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	.	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R	G	E	S	N	P	L
Query Conservation																																			.
Alig confidence																																			.														.	.	.
Template Conservation																																																	.	.	.
Template Sequence		A	G	V	A	V	G	K	A	D	G	V	I	I	L	D	L	N	E	T	E	D	M	W	G	E	A	D	M	P	I	A	M	M	P	S	L	N	Q	V	T	L	F	Q	L	N	G	S	.	.	.	M	T	P	D	E	F	R	Q	A	F	D	L	A	V	K	G	I	N	I	I
Template Known Secondary structure									S	S	S					S										S									T	T	T	T											.	.	.
Template Predicted Secondary structure																																																	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions