Job Description P0CG19 Confidence 100.00% Date Thu Jan 5 11:31:53 GMT 2012 Rank 7 Aligned Residues 219 % Identity 23% Template c2ba0I_ PDB info PDB header:rna binding protein Chain: I: PDB Molecule:archeal exosome rna binding protein rrp42; PDBTitle: archaeal exosome core Resolution 2.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	P	A	G	R	S	N	N	Q	V	R	P	V	T	L	T	R	N	Y	T	K	H	A	E	G	S	V	L	V	E	F	G	D	T	K	V	L	C	T	A	S	I	E	E	G	V	P	R	F	L	K	G	Q	G	Q	G	W	I	T	A	E	Y	G	M	L	P	R	S	T	H	T	R	N	A	R	E	A	A	K
Query Conservation
Alig confidence																																																		.																									.	.	.	.	.	.	.
Template Conservation																																																		.																									.	.	.	.	.	.	.
Template Sequence		E	R	I	D	G	R	G	F	D	E	F	R	K	V	E	I	I	P	N	V	I	E	K	A	E	G	S	A	L	V	K	L	G	D	T	Q	V	V	V	G	V	K	M	Q	P	G	E	P	.	Y	P	D	T	P	D	R	G	V	I	I	V	N	A	E	L	V	P	L	A	S	P	T	F	.	.	.	.	.	.	.
Template Known Secondary structure				T	T				T	T													T	T	S	S								T	T															.		T	T		T	T	S											S	T	T		T	T		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																		.																									.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.									.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.
Query Sequence		G	K	Q	G	G	R	T	M	E	I	Q	R	L	I	A	R	A	L	R	A	A	.	.	.	.	.	.	.	.	V	D	L	K	A	L	G	E	F	T	I	T	L	D	C	D	V	L	Q	A	D	G	G	T	R	T	A	S	I	T	G	A	C	V	A	L	V	D	A	L	Q	K	L	V	E	N	G	K	L	K	T
Query Conservation																							.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	P	P	D	E	N	S	I	E	L	A	R	V	V	D	R	G	I	R	E	S	E	A	V	D	L	S	K	L	V	I	E	E	G	E	K	V	W	I	V	F	V	D	I	H	A	L	D	D	D	G	N	L	L	D	A	S	A	L	A	A	I	A	A	L	M	N	T	K	V	P	A	E	R	F	D	L	G	E	D
Template Known Secondary structure																						T	T		B		G	G	G	G	B	S	S	T	T	S															S	S																T					T	G	G	G	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
				153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	P	M	K	G	M	V	A	A	V	S	V	G	I	V	N	G	E	A	V	C	D	L	E	Y	V	E	D	S	A	A	E	T	D	M	N	V	V	M	T	E	D	G	R	I	I	E	V	Q	G	T	A	E	G	E	P	F	T	H	E	E	L	L	I	L	L	A	L	A	R	G	E	S	N	P	L
Query Conservation		.	.
Alig confidence		.	.																																																					.
Template Conservation																																																								.
Template Sequence		Y	L	L	P	V	R	D	L	P	V	S	V	T	S	L	I	V	G	N	K	Y	L	V	D	P	S	R	E	E	M	S	V	G	D	T	T	L	T	I	T	T	D	K	D	D	N	V	V	A	M	Q	K	S	G	.	G	Y	L	L	D	E	K	L	F	D	E	L	L	D	V	S	I	N	C	A	R	K	L
Template Known Secondary structure						B													T	T					S			T	T	G	G	G	G		S									T	T										S	.	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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