Return to main results Retrieve Phyre Job Id

Job DescriptionP21177
Confidence99.53%DateThu Jan 5 11:37:58 GMT 2012
Rank124Aligned Residues124
% Identity20%Templated9ldta1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   312.......320.........330....... ..340.........350.........360.........370.........380.........
Predicted Secondary structure 







..













Query SS confidence 

























. .



















































Query Sequence  TPKQAAVLGAGIMGGGIAYQSAWKGV. . PVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAG
Query Conservation   
  
 




 

  

   
 

 .. 
 
 
     
      
   
      
 
           
        
Alig confidence 

























..





























.............








Template Conservation 
  







 

  

  

  
   



 
            
           .............         
Template Sequence  PHNKITVVGVGAVGMACAISILMKELADEIALVDVMEDKLKGEMMDLQHGSLFLRTPK. . . . . . . . . . . . . IVSGKDYNV
Template Known Secondary structure 
SS

STT

S
S
TGGG
S

.............SSGGG
Template Predicted Secondary structure 

















.............


Template SS confidence 















































































   1920.........30.........40.........50.........60.........70...... ...80.....
 
   390.........400 .........410.........420.... .....430.........440... .....
Predicted Secondary structure 





..............







.








.
Query SS confidence 










. . . . . . . . . . . . . .























.


















.




Query Sequence  FDRVDIVVEAV. . . . . . . . . . . . . . VENPKVKKAVLAETEQKVRQDTVL. ASNTSTIPISELANALERP. ENFCG
Query Conservation 
  







.............. 
 
  
  
   
        

.






 
  

     
. 
 

Alig confidence 










..............























.


















.




Template Conservation 
  





  
     
         
  
  

   
    
 
 

  





 
       
 
  



Template Sequence  TANSRLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKYSPNCKLLVVSNPVDILTYVAWKISGFPKNRVIG
Template Known Secondary structure  GTT
S

S



TT

GGGG
TT

SSS


TTS
Template Predicted Secondary structure 
























Template SS confidence 










































































   88.90.........100.........110.........120.........130.........140.........150.........160..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions