Return to main results Retrieve Phyre Job Id

Job DescriptionP21177
Confidence98.71%DateThu Jan 5 11:37:58 GMT 2012
Rank216Aligned Residues136
% Identity18%Templated1yg6a1
SCOP infoClpP/crotonase ClpP/crotonase Clp protease, ClpP subunit
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   31........40.........50........ .60.........70.........80.........90.........100........
Predicted Secondary structure 






..




















Query SS confidence 



























. .

















































Query Sequence  LDTATVASLGEAIGVLEQQSDLKGLLLR. . SNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAA
Query Conservation 
       
  

     
  

 



..
 
  
 




                       
   
   






Alig confidence 



























..






........................


















Template Conservation 
       
   
           
 
 





   ........................    
   
      
   
Template Sequence  VEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVIT. . . . . . . . . . . . . . . . . . . . . . . . AGMSIYDTMQFIKPDVSTI
Template Known Secondary structure  B

SSS


B
........................SSS
Template Predicted Secondary structure 











........................



Template SS confidence 















































































   35....40.........50.........60.........70. ........80.........90
 
   109110.........120.... .....130.........140.........150........ .160.........
Predicted Secondary structure 

..
















.................

Query SS confidence 















. .

































. . . . . . . . . . . . . . . . .










Query Sequence  VNGYALGGGCECVLAT. . DYRLATPDLRIGLPETKLGIMPGFGGSVRMPRML. . . . . . . . . . . . . . . . . GADSALEIIAA
Query Conservation 
 
 
 


 





..
 


   
 





 


 
  


  
 


.................
   
 

 

Alig confidence 















..

































.................










Template Conservation 
 
 



   
  

                       
                                 
      
Template Sequence  CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTER
Template Known Secondary structure  TTS
TT

TT








S



TSS
Template Predicted Secondary structure 






























Template SS confidence 















































































   91........100.........110.........120.........130.........140.........150.........160.........170
 
   170.........180.........190
Predicted Secondary structure 











Query SS confidence 




















Query Sequence  GKDVGADQALKIGLVDGVVKA
Query Conservation 
    
 

   



 

  
Alig confidence 




















Template Conservation      

 



 



 
   
Template Sequence  DRFLSAPEAVEYGLVDSILTH
Template Known Secondary structure 
TSSS


Template Predicted Secondary structure 









Template SS confidence 




















   171........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions