Return to main results Retrieve Phyre Job Id

Job DescriptionP21177
Confidence99.54%DateThu Jan 5 11:37:58 GMT 2012
Rank121Aligned Residues126
% Identity17%Templated1t2da1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains LDH N-terminal domain-like
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   312.......320.........330....... ..340.........350.........360.........370.........380.........390
Predicted Secondary structure 







.













Query SS confidence 

























.




















































Query Sequence  TPKQAAVLGAGIMGGGIAYQSAWKGV. PVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGF
Query Conservation   
  
 




 

  

   
 

 . 
 
 
     
      
   
      
 
           
        
Alig confidence 

























.






























............









Template Conservation 

 

 




 

  

  

  
   
 
 
                         ............        

Template Sequence  PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCK. . . . . . . . . . . . VSGSNTYDDL
Template Known Secondary structure 




STT


SSSSTT



............

GGGG
Template Predicted Secondary structure 
















............


Template SS confidence 















































































   2.......10.........20.........30.........40.........50......... 60.........
 
   391........400 .........410.........420.... .....430.........440... ......
Predicted Secondary structure 





...................







.








.
Query SS confidence 









. . . . . . . . . . . . . . . . . . .























.


















.





Query Sequence  DRVDIVVEAV. . . . . . . . . . . . . . . . . . . VENPKVKKAVLAETEQKVRQDTVL. ASNTSTIPISELANALERP. ENFCGM
Query Conservation    







................... 
 
  
  
   
        

.






 
  

     
. 
 

 
Alig confidence 









...................























.


















.





Template Conservation    





                       
  
   
   
        


 


  
        

    



 
Template Sequence  AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGL
Template Known Secondary structure  TT
S

S
SS
TT

STT

GGGG
TTS
SSS


GGG
Template Predicted Secondary structure 





























Template SS confidence 















































































   70.........80.........90.........100.........110.........120.........130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions