Return to main results Retrieve Phyre Job Id

Job DescriptionP21177
Confidence100.00%DateThu Jan 5 11:37:58 GMT 2012
Rank78Aligned Residues223
% Identity22%Templated1rjma_
SCOP infoClpP/crotonase ClpP/crotonase Crotonase-like
Resolution2.15

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVP
Query Conservation 
             



 


  
   


       
  

     
  

 




 
  
 




          
Alig confidence 










































































.....
Template Conservation        
        

  



 
   


       
  

     
  
  


 
 
  
  
 
      .....
Template Sequence  FDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGG. . . . .
Template Known Secondary structure 
TT
SSSSSS

GGGTT



TT





TTT





.....
Template Predicted Secondary structure 


























.....
Template SS confidence 















































































   31........40.........50.........60.........70.........80.........90.........100.....
 
   81........90.........100.........110.........120......... 130.........140.........150.........
Predicted Secondary structure 






.
















Query SS confidence 
















































.





























Query Sequence  EEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLA. TPDLRIGLPETKLGIMPGFGGSVRMPRMLG
Query Conservation               
   
   







 
 
 


 






 


.   
 





 


 
  


  
 



Alig confidence  .........







































.





























Template Conservation  .........             






 
 
 


  
 
  
  

    
 
  

   
  
       
    
Template Sequence  . . . . . . . . . HILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVG
Template Known Secondary structure  .........
SSS
STSSTTT


T



STTT
Template Predicted Secondary structure  .........


















Template SS confidence 















































































   135....140.........150.........160.........170.........180.........190.........200.....
 
   160.........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  ADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGM
Query Conservation     
 

 


    
 

   



 

    
   
   
  

                              
   
Alig confidence 


















































.............................
Template Conservation     
  
 
 
    
 

   


  

   

   
   
  

     .............................
Template Sequence  QKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 


TS
S
GGGTS
.............................
Template Predicted Secondary structure 















.............................
Template SS confidence 















































































   206...210.........220.........230.........240.........250......
 
   240.........250.........260.........270 ......
Predicted Secondary structure 








.
Query SS confidence 






























.





Query Sequence  VAQTAGKHYPAPITAVKTIEAAARFGREEAL. NLENKS
Query Conservation            
    
  
           
.  
   
Alig confidence  ..........




















.





Template Conservation  ..........
    
  
           
 
 

 
Template Sequence  . . . . . . . . . . AQRMLKFAFNLLDDGLVGQQLFAGEATR
Template Known Secondary structure  ..........TTS
Template Predicted Secondary structure  ..........
Template SS confidence 





































   257..260.........270.........280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions