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Job DescriptionP21177
Confidence100.00%DateThu Jan 5 11:37:58 GMT 2012
Rank31Aligned Residues262
% Identity29%Templated1hzda_
SCOP infoClpP/crotonase ClpP/crotonase Crotonase-like
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GDTLYLDWLE. . . DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKA. AFIVGADITEFLSLFLVP
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Template Sequence  EDELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKM. . . S
Template Known Secondary structure 

S

GGGTT

GGGTT
B
TT
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SSBT

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   74.....80.........90.........100.........110.........120.........130.........140......... 150
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  EEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGA
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Template Sequence  SSEVGPFVSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGM
Template Known Secondary structure  T
SS
STSSTT


GGGGT



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   151........160.........170.........180.........190.........200.........210.........220.........230
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  DSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMV
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Template Sequence  SLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure  T
TS
S


TTS
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   231........240.........250.........260.........270......
 
   241........250.........260.........270.........280.........290.........300....
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Query Sequence  AQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAK
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Template Sequence  . EFLPQGPVAMRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRYKGE
Template Known Secondary structure  .TTTTS
TS
TTTT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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