Job Description P21177 Confidence 98.08% Date Thu Jan 5 11:37:58 GMT 2012 Rank 263 Aligned Residues 117 % Identity 21% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		315	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.								.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure									.																	.	.	.	.	.	.	.								.	.
Query SS confidence									.																	.	.	.	.	.	.	.								.	.
Query Sequence		Q	A	A	V	L	G	A	.	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	.	.	.	.	.	P	V	V	M	K	D	I	.	.	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T
Query Conservation									.																	.	.	.	.	.	.	.								.	.
Alig confidence									.																	.	.	.	.	.	.	.								.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	V	T	G	A	A	G	Q	I	A	Y	S	L	L	Y	S	I	G	N	G	S	V	F	G	K	D	Q	P	I	I	L	V	L	L	D	I	T	P	M	M	G	V	L	D	G	V	L	M	E	L	Q	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	P	L	L	K	D	V	I	A	T
Template Known Secondary structure							S	T	T	S	T											T	T	T	T	T		T	T											G	G	G														T	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60	.	.	.	.	.	.	.	.	.	70
		385	.	.		.	.	390	.	.	.	.	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.			.	.	.	.	.	.	.	430	.	.	.	.	.	.	.							.	.	440	.
Predicted Secondary structure					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Query SS confidence					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Query Sequence		L	D	Y	.	A	G	F	D	R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	.	.	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	.	.	.	.	.	.	N	A	L	E
Query Conservation					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.																.	.	.	.	.	.
Alig confidence					.													.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.						.	.	.	.							.	.	.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		D	K	E	E	I	A	F	K	D	L	D	V	A	I	L	V	G	S	M	P	R	R	D	G	M	E	R	K	D	L	L	K	A	N	V	K	I	F	K	C	Q	G	A	A	L	D	K	Y	A	K	K	S	V	K	V	I	V	V	G	N	.	.	.	.	P	A	N	T	N	C	L	T	A	S	K	S	A	P	S	I
Template Known Secondary structure		S						T	T	T		S							S					S	S	S		S		T	T																			S		T	T							S	S	.	.	.	.	S											T		T	T	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		442	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	E	N	F	C	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	E	N	F	S	C	L
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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