Job Description P21177 Confidence 99.25% Date Thu Jan 5 11:37:58 GMT 2012 Rank 159 Aligned Residues 213 % Identity 17% Template c3plnA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: crystal structure of klebsiella pneumoniae udp-glucose 6-dehydrogenase2 complexed with udp-glucose Resolution 1.50 Å

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		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		E	T	P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	.	.	.	.	T	I	H	P	T	L	D
Query Conservation																																																																							.	.	.	.
Alig confidence																										.																				.	.	.	.	.	.	.	.	.	.																.	.	.	.
Template Conservation																										.																				.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	F	M	K	I	T	I	S	G	T	G	Y	V	G	L	S	N	G	V	L	I	A	Q	.	N	H	E	V	V	A	L	D	I	V	Q	A	K	V	D	M	L	N	Q	.	.	.	.	.	.	.	.	.	.	K	I	S	P	I	V	D	K	E	I	Q	E	Y	L	A	E	K	P	L	N	F	R	A	T	T	D
Template Known Secondary structure		T	T	S									S												T	.	T	S							S										T	.	.	.	.	.	.	.	.	.	.	T			S	S												S								S
Template Predicted Secondary structure																										.																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		997	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020		.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.											1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.
		387		.	.	390	.	.	.	.	.	.	.	.	.	400	.										.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.		.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
Predicted Secondary structure			.															.	.	.	.	.	.	.	.	.																															.
Query SS confidence			.															.	.	.	.	.	.	.	.	.																															.
Query Sequence		Y	.	A	G	F	D	R	V	D	I	V	V	E	A	V	V	.	.	.	.	.	.	.	.	.	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	.	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	P	V
Query Conservation			.															.	.	.	.	.	.	.	.	.																															.
Alig confidence			.															.	.	.	.	.	.	.	.	.																															.
Template Conservation
Template Sequence		K	H	D	A	Y	R	N	A	D	Y	V	I	I	A	T	P	T	D	Y	D	P	K	T	N	Y	F	N	T	S	T	V	E	A	V	I	R	D	V	T	E	I	N	P	N	A	V	M	I	I	K	S	T	I	P	V	G	F	T	R	D	I	K	E	R	L	G	I	D	N	V	I	F	S	P	E	F	L	R	E	G
Template Known Secondary structure							T	T		S												T	T	T	T																			T	T	S						S				T	T										T													T	T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
						456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.			.	.	490	.	.	.	.	.	.						.	.	.	500	.	.	.	.				.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520
Predicted Secondary structure		.	.	.	.																																	.	.										.	.	.	.	.									.	.	.													.
Query SS confidence		.	.	.	.																																	.	.										.	.	.	.	.									.	.	.													.
Query Sequence		.	.	.	.	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	.	.	P	I	V	V	N	D	C	P	G	.	.	.	.	.	F	F	V	N	R	V	L	F	.	.	.	P	Y	F	A	G	F	S	Q	L	L	R	D	.	G	A	D	F
Query Conservation		.	.	.	.																																	.	.										.	.	.	.	.									.	.	.													.
Alig confidence		.	.	.	.														.																			.	.										.	.	.	.	.									.	.	.													.
Template Conservation																			.
Template Sequence		R	A	L	Y	D	N	L	H	P	S	R	I	V	I	G	E	R	.	S	A	R	A	E	R	F	A	D	L	L	K	E	G	A	I	K	Q	D	I	P	T	L	F	T	D	S	T	E	A	E	A	I	K	L	F	A	N	T	Y	L	A	L	R	V	A	Y	F	N	E	L	D	S	Y	A	E	S	Q	G	L	N	S
Template Known Secondary structure		S							S		S					S	S		.	S															S	S	S	S																																								T
Template Predicted Secondary structure																			.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		521	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		K	Q	I	I	E	G	V	.	.	C	L	D	P	R	I	G	N
Template Known Secondary structure									.	.		T	S	T	T	T		S
Template Predicted Secondary structure									.	.
Template SS confidence
		226	.	.	.	230	.	.			.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions