Job Description P21177 Confidence 98.75% Date Thu Jan 5 11:37:58 GMT 2012 Rank 213 Aligned Residues 139 % Identity 14% Template c3p2lD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: crystal structure of atp-dependent clp protease subunit p from2 francisella tularensis Resolution 2.29 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		K	L	D	T	A	T	V	A	S	L	G	E	A	I	G	V	L	E	Q	Q	S	D	L	K	G	L	L	L	R	.	.	S	N	K	A	A	F	I	V	G	A	D	I	T	E	F	L	S	L	F	L	V	P	E	E	Q	L	S	Q	W	L	H	F	A	N	S	V	F	N	R	L	E	D	L	P	V	P	T	I	A
Query Conservation																															.	.
Alig confidence																															.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	N	D	H	S	A	N	L	V	I	A	Q	L	L	F	L	E	S	E	D	P	D	K	D	I	Y	F	Y	I	N	S	P	G	G	X	V	T	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	G	V	Y	D	T	X	Q	F	I	K	P	D	V	S	T
Template Known Secondary structure			B																				S	S	S											B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																									.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																		.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	N	G	Y	A	L	G	G	G	C	E	C	V	L	A	T	.	.	D	Y	R	L	A	T	P	D	L	R	I	G	L	P	E	T	K	L	G	I	M	P	G	F	G	G	S	V	R	M	P	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	D	S	A	L	E	I	I	A
Query Conservation																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	C	I	G	L	A	A	S	X	G	S	L	L	L	A	G	G	A	K	G	K	R	Y	S	L	P	S	S	Q	I	X	I	H	Q	P	L	G	G	F	R	G	Q	A	S	D	I	E	I	H	A	K	N	I	L	R	I	K	D	R	L	N	K	V	L	A	H	H	T	G	Q	D	L	E	T	I	V	K	D	T	D
Template Known Secondary structure									T								T	S	S	T	T						T	T														S																																							S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	D	V	G	A	D	Q	A	L	K	I	G	L	V	D	G	V	V	K	A	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	N	F	X	X	A	D	E	A	K	A	Y	G	L	I	D	H	V	I	E	S	R	E
Template Known Secondary structure		S													T	S		S						S
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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