Job Description P21177 Confidence 99.43% Date Thu Jan 5 11:37:58 GMT 2012 Rank 140 Aligned Residues 197 % Identity 16% Template c3ojlA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:cap5o; PDBTitle: native structure of the udp-n-acetyl-mannosamine dehydrogenase cap5o2 from staphylococcus aureus Resolution 2.80 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.									.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	.	.	.	.	.	.	.	.	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L
Query Conservation																																											.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	L	T	V	V	G	L	G	Y	I	G	L	P	T	S	I	M	F	A	K	H	G	V	D	V	L	G	V	D	I	N	Q	Q	T	I	D	K	L	Q	N	G	Q	I	S	I	E	E	P	G	L	Q	E	V	Y	E	E	V	L	S	S	G	K	L	K	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	T	T											T	T								S										T	T			S	S			T	T											T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.											.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.				.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																																		.	.	.
Query Sequence		D	Y	A	G	F	D	R	V	D	I	V	V	E	A	V	V	E	.	.	.	.	.	.	.	.	.	.	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	.	.	.	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F
Query Conservation																			.	.	.	.	.	.	.	.	.	.																																		.	.	.
Alig confidence		.	.																.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Conservation		.	.
Template Sequence		.	.	T	T	P	E	A	S	D	V	F	I	I	A	V	P	T	P	N	N	D	D	Q	Y	R	S	C	D	I	S	L	V	M	R	A	L	D	S	I	L	P	F	L	K	K	G	N	T	I	I	V	E	S	T	I	A	P	K	T	M	D	D	F	V	K	P	V	I	E	N	L	G	F	T	I	G	E	D	I	Y
Template Known Secondary structure		.	.	S	S					S										B		S	S	T	T			B													G	G	G			T	T							S				T	T					T							T	T	T			B	T	T	T	B
Template Predicted Secondary structure		.	.
Template SS confidence
				68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.													.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.									.	.	.	.	.	.	.	.	510	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.
Query Sequence		N	P	V	H	R	M	P	L	V	E	.	.	.	.	.	.	.	.	.	.	.	.	I	I	R	G	E	K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	.	.	.	.	.	.	.	.	V	L	F	P	Y	F	A	G	F	S	Q
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.					.	.																																		.	.	.	.	.	.	.	.
Template Conservation																												.	.
Template Sequence		L	V	H	C	P	E	R	V	L	P	G	K	I	L	E	E	L	V	H	N	N	R	I	I	G	G	.	.	V	T	K	A	C	I	E	A	G	K	R	V	Y	R	T	F	V	Q	G	E	M	I	E	T	D	A	R	T	A	E	M	S	K	L	M	E	N	T	Y	R	D	V	N	I	A	L	A	N	E	L	T	K
Template Known Secondary structure											S	S									S							.	.	S	S												T	T	T			S
Template Predicted Secondary structure																												.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		513	.	.	.		.	.	.	520	.	.	.	.	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	L	R	D	.	G	A	D	F	R	K	I	D	K	V	M
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		I	C	N	N	L	N	I	N	V	L	D	V	I	E	M	A
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions