Job Description P21177 Confidence 96.46% Date Thu Jan 5 11:37:58 GMT 2012 Rank 402 Aligned Residues 203 % Identity 20% Template c3mtjA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: the crystal structure of a homoserine dehydrogenase from thiobacillus2 denitrificans to 2.15a Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.											.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	.	.	.	.	.	.	.	.	.	.	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T
Query Conservation																								.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	G	L	L	G	L	G	T	V	G	G	G	T	L	T	V	L	R	R	N	A	E	E	I	T	R	R	A	G	R	E	I	R	V	V	R	A	A	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	D	K	A	E	A	L	A	G	G	L	P	L	T
Template Known Secondary structure																						T									S	S										S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		385	.	.	.	.	390				.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		L	D	Y	A	G	F	.	.	.	D	R	V	D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V
Query Conservation								.	.	.
Alig confidence								.	.	.																												.	.	.									.	.
Template Conservation																																						.	.	.									.	.
Template Sequence		T	N	P	F	D	V	V	D	D	P	E	I	D	I	V	V	E	L	I	G	G	L	E	P	A	R	E	L	V	X	Q	A	I	A	N	G	.	.	.	K	H	V	V	T	A	N	K	.	.	H	L	V	A	K	Y	G	N	E	I	F	A	A	A	Q	A	K	G	V	X	V	T	F	E	A	A	V	A	G	G	I
Template Known Secondary structure		S		T					T		T	T										S	S	T	T											T	T	.	.	.									.	.																		T						G	G	G	S	S	T	T	S
Template Predicted Secondary structure																																						.	.	.									.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.				.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		462	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	R	G	E	K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	G	A	D	F	R	K	I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P	A	Y	L	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.																.						.
Template Conservation					.	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.																.						.
Template Sequence		P	I	I	.	.	.	.	.	.	.	K	A	L	R	E	G	L	.	T	A	N	R	I	E	W	L	A	G	I	I	N	G	T	S	N	F	I	L	S	E	X	R	.	.	.	.	.	.	.	.	.	.	.	D	K	G	A	A	F	D	D	V	L	K	E	A	Q	R	.	L	G	Y	A	E	.	A	D	P	T	F
Template Known Secondary structure					.	.	.	.	.	.	.					T	T	T	.	T	T	S																						.	.	.	.	.	.	.	.	.	.	.																.		T	S	S		.	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.								.																									.	.	.	.	.	.	.	.	.	.	.																.						.
Template SS confidence
		136	.	.								.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.												170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.		190	.	.	.	.
		542	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	V	G	I	D	T	A	H	H	A	Q	A	V	M	A	A	G	F	P	Q	R	M	Q	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	E	G	I	D	A	A	H	K	L	T	I	L	S	A	I	A	F	G	I	P	X	Q	F	E
Template Known Secondary structure				T	S																T					G	G
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions