Job Description P21177 Confidence 100.00% Date Thu Jan 5 11:37:58 GMT 2012 Rank 6 Aligned Residues 398 % Identity 30% Template c3mogA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:probable 3-hydroxybutyryl-coa dehydrogenase; PDBTitle: crystal structure of 3-hydroxybutyryl-coa dehydrogenase from2 escherichia coli k12 substr. mg1655 Resolution 2.20 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	V	Q	T	V	A	V	I	G	S	G	T	M	G	A	G	I	A	E	V	A	A	S	H	G	H	Q	V	L	L	Y	D	I	S	A	E	A	L	T	R	A	I	D	G	I	H	A	R	L	N	S	R	V	T	R	G	K	L	T	A	E	T	C	E	R	T	L	K	R	L	I	P	V	T	D	I	H	A	L	A
Template Known Secondary structure												S													T	T								S																		T	T	T	T	T	T	S	S											T							G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	D	L	V	I	E	A	A	S	E	R	L	E	V	K	K	A	L	F	A	Q	L	A	E	V	C	P	P	Q	T	L	L	T	T	N	T	S	S	I	S	I	T	A	I	A	A	E	I	K	N	P	E	R	V	A	G	L	H	F	F	N	P	A	P	V	M	K	L	V	E	V	V	S	G	L	A	T	A	A
Template Known Secondary structure		G		S																								S		T	T								S	S	S						T	T	T	S	S	S	G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	G	.	A	D	F	R	K	I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P	A	Y	L	L	D	V	V	G	I	D	T	A	H
Query Conservation																																																.
Alig confidence																																																.
Template Conservation
Template Sequence		E	V	V	E	Q	L	C	E	L	T	L	S	W	G	K	Q	P	V	R	C	H	S	T	P	G	F	I	V	N	R	V	A	R	P	Y	Y	S	E	A	W	R	A	L	E	E	Q	V	A	A	P	E	V	I	D	A	A	L	R	D	G	A	G	F	P	M	G	P	L	E	L	T	D	L	I	G	Q	D	V	N	F
Template Known Secondary structure														T	T								S		T	T	T	T					T													T	T		S												T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	A	Q	A	V	M	A	A	G	F	P	Q	R	M	Q	K	D	Y	R	D	A	I	D	A	L	F	D	A	N	R	F	G	Q	K	N	G	L	G	F	W	R	Y	K	E	D	S	K	G	K	P	K	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	T	C	S	V	F	N	A	F	W	Q	E	R	R	F	L	P	S	L	V	Q	Q	E	L	V	I	G	G	R	L	G	K	K	S	G	L	G	V	Y	D	W	R	A	E	R	E	A	V	V	G	L	E	A	V	S	D	S	F	S	P	M	K	V	E	K	K	S	D	G	V	T	E	I	D	D	V	L	L	I
Template Known Secondary structure											T	T	S		G	G	G												T	T			B	G	G	G	T	B	S	S	S	B	T	T	S													G	G	G			S						S	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
																																										604	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.			.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	A	A	V	E	D	L	L	A	E	V	S	Q	P	K	R	D	F	S	E	E	.	.	E	I	I	A	R	M	M	I	P	M	V	N	E	V	V	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		E	T	Q	G	E	T	A	Q	A	L	A	I	R	L	A	R	P	V	V	V	I	D	K	M	A	G	K	V	V	T	I	A	A	A	A	V	N	P	D	S	A	T	R	K	A	I	Y	Y	L	Q	Q	Q	G	K	T	V	L	Q	I	A	D	Y	P	G	M	L	I	W	R	T	V	A	M	I	I	N	E	A	L	D
Template Known Secondary structure				S	S	S										T	S									S	S	S								T	T	S														T	T	T										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.		.	.		.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure																																																					.			.
Query SS confidence																																																					.			.
Query Sequence		C	L	E	E	G	I	I	A	T	P	A	E	A	D	M	A	L	V	Y	G	L	G	F	P	P	F	H	G	G	A	F	R	W	L	D	T	L	G	S	A	K	Y	L	D	M	A	Q	Q	Y	Q	H	.	L	G	.	P	L	Y	E	V	P	E	G	L	R	N	K	A	R	H	N	E	P	Y
Query Conservation																																																					.			.
Alig confidence									.																		.	.	.																								.			.
Template Conservation									.																		.	.	.
Template Sequence		A	L	Q	K	G	V	A	.	S	E	Q	D	I	D	T	A	M	R	L	G	V	N	Y	P	Y	.	.	.	G	P	L	A	W	G	A	Q	L	G	W	Q	R	I	L	R	L	L	E	N	L	Q	H	H	Y	G	E	E	R	Y	R	P	C	S	L	L	R	Q	R	A	L	L	E	S	G	Y
Template Known Secondary structure					T	T	S	S	.													S			S	S	.	.	.																												G	G	G														T
Template Predicted Secondary structure									.																		.	.	.
Template SS confidence
		404	.	.	.	.	.	410		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.				.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.