Job Description P21177 Confidence 99.62% Date Thu Jan 5 11:37:58 GMT 2012 Rank 105 Aligned Residues 242 % Identity 15% Template c3l6dB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of putative oxidoreductase from pseudomonas putida2 kt2440 Resolution 1.90 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	.	A	G	F	D	R	V
Query Conservation																																																																											.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	V	S	V	I	G	L	G	A	X	G	T	I	X	A	Q	V	L	L	K	Q	G	K	R	V	A	I	W	N	R	S	P	G	K	A	A	A	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	H	L	C	E	S	V	K	A	A	L	S	A	S
Template Known Secondary structure		S							S													T	T								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T					S	S								S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																									.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.				.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	.	.	.	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.
Template Conservation
Template Sequence		P	A	T	I	F	V	L	L	D	N	H	A	T	H	E	V	L	G	X	P	G	V	A	R	A	L	A	H	R	T	I	V	D	Y	T	T	N	A	Q	D	E	G	L	A	L	Q	G	L	V	N	Q	A	G	G	H	Y	V	K	G	X	I	V	A	Y	P	R	N	V	G	H	R	E	S	H	S	I	H	T	G	D
Template Known Secondary structure		S							S	S										S	T	T						T	T							S																	T	T										S		G	G	G	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.								.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.														.																						.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.														.																						.	.	.	.
Query Sequence		D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	.	.	.	.	.	.	.	P	Y	F	A	G	F	S	Q	L	L	R	D	G	.	A	D	F	R	K	I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P	A	.	.	.	.
Query Conservation																																				.	.	.	.	.	.	.														.																						.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.														.																						.	.	.	.
Template Conservation
Template Sequence		R	E	A	F	E	Q	H	R	A	L	L	E	G	L	A	G	H	T	V	F	L	P	W	D	E	A	L	A	F	A	T	V	L	H	A	H	A	F	A	A	X	V	T	F	F	E	A	V	G	A	G	D	R	F	G	L	P	V	S	K	T	A	R	L	L	L	E	T	S	R	F	F	V	A	D	A	L	E	E	A
Template Known Secondary structure								T					T	T	T		S																																						T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
															539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	L	D	V	V	G	I	D	T	A	H	H	A	Q	A	V	M	A	A	G	F	P	Q	R	M	Q	K	D	Y	R	D	A	I	D	A	L	F	D	A	N	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	R	L	E	T	Q	D	F	K	G	D	Q	A	R	L	D	V	H	A	D	A	F	A	H	I	A	Q	S	L	H	A	Q	G	V	W	T	P	V	F	D	A	V	C	Q	V	V	Q	R	A	A	A	X	G	Y
Template Known Secondary structure								T				T	T	S	S	B																			T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions