Job Description P21177 Confidence 98.88% Date Thu Jan 5 11:37:58 GMT 2012 Rank 193 Aligned Residues 141 % Identity 16% Template c3kthD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:atp-dependent clp protease proteolytic subunit; PDBTitle: structure of clpp from bacillus subtilis in orthorombic crystal form Resolution 3.00 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	D	T	A	T	V	A	S	L	G	E	A	I	G	V	L	E	Q	Q	S	D	L	K	G	L	L	L	R	S	N	K	A	A	F	I	V	G	A	D	I	T	E	F	L	S	L	F	L	V	P	E	E	Q	L	S	Q	W	L	H	F	A	N	S	V	F	N	R	L	E	D	L	P	V	P	T	I	A	A	V
Query Conservation
Alig confidence																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	D	D	N	V	A	N	S	I	V	S	Q	L	L	F	L	A	A	E	D	P	E	K	E	I	S	L	Y	.	.	.	.	I	N	S	P	G	G	S	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	M	A	I	Y	D	T	M	Q	F	I	K	P	K	V	S	T	I	C
Template Known Secondary structure			B																				S	S	S						.	.	.	.						B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	S	S
Template Predicted Secondary structure																															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.																			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																		.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	G	Y	A	L	G	G	G	C	E	C	V	L	A	T	D	.	.	Y	R	L	A	T	P	D	L	R	I	G	L	P	E	T	K	L	G	I	M	P	G	F	G	G	S	V	R	M	P	R	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	D	S	A	L	E	I	I	A	A	G
Query Conservation																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	G	M	A	A	S	M	G	A	F	L	L	A	A	G	E	K	G	K	R	Y	A	L	P	N	S	E	V	M	I	H	Q	P	L	G	G	A	Q	G	Q	A	T	E	I	E	I	A	A	K	R	I	L	L	L	R	D	K	L	N	K	V	L	A	E	R	T	G	Q	P	L	E	V	I	E	R	D	T	D	R	D
Template Known Secondary structure							T									S		T	T						T	T														S	S																																					T	S	S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	V	G	A	D	Q	A	L	K	I	G	L	V	D	G	V	V	K	A	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	F	K	S	A	E	E	A	L	E	Y	G	L	I	D	K	I	L	T	H	L	E
Template Known Secondary structure													T	S		S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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