Job Description P21177 Confidence 97.30% Date Thu Jan 5 11:37:58 GMT 2012 Rank 333 Aligned Residues 167 % Identity 15% Template c3kboB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glyoxylate/hydroxypyruvate reductase a; PDBTitle: 2.14 angstrom crystal structure of putative oxidoreductase (ycdw) from2 salmonella typhimurium in complex with nadp Resolution 2.14 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	N	D	Q	Y	V	K	G	K	A	K	K	L	T	K	D	V	E	T	P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	Q	A	L	K	N	Q	A	L	W	K	P	L	P	E	Y	T	R	E	E	F	S	V	G	I	X	G	A	G	V	L	G	A	K	V	A	E	S	L	Q	A	W	G	F	P	L	R	C	W	S	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	K
Template Known Secondary structure								T	T	T										S	T	T									S												T	T	T								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																										.	170
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.														.
Query SS confidence																																																										.	.														.
Query Sequence		K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D	R	V	D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	.	.	S	T	I	P	I	S	E	L	A	N	A	L	E	.	R	P	E	N	F	C	G	M
Query Conservation																																																										.	.														.
Alig confidence																																																										.	.														.
Template Conservation
Template Sequence		S	W	P	G	V	E	S	Y	V	G	R	E	E	L	R	A	F	L	N	Q	T	R	V	L	I	N	L	L	P	N	T	A	Q	T	V	G	I	I	N	S	E	L	L	D	Q	L	P	D	G	A	Y	V	L	N	L	A	R	G	V	H	V	Q	E	A	D	L	L	A	A	L	D	S	G	K	L	K	G	A	X	L
Template Known Secondary structure				T	T						S	T	T	T							T		S										T	T	T	T	T		B	S						T	S		T	T							S		G	G	G	B												T	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		450	.	.	.	.									.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.
Query Sequence		H	F	F	N	P	.	.	.	.	.	.	.	.	V	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M
Query Conservation							.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	F	S	Q	E	P	L	P	Q	E	S	P	L	W	R	H	P	R	V	A	X	T	P	H	I	A	A	V	T	R	P	A	E	A	I	D	Y	I	S	R	T	I
Template Known Secondary structure		S			S	S	S	S			T	T		T	T	T	T		T	T					S	S		S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions