Return to main results Retrieve Phyre Job Id

Job DescriptionP21177
Confidence96.80%DateThu Jan 5 11:37:58 GMT 2012
Rank364Aligned Residues118
% Identity16%Templatec3hg7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-isomer specific 2-hydroxyacid dehydrogenase family PDBTitle: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase2 family protein from aeromonas salmonicida subsp. salmonicida a449
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   293......300.........310.........320.........330.........340.........350.........360.........370..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  FLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGL
Query Conservation 
   
 
             
  
 




 

  

   
 

  
 
 
     
      
   
      
 
   
Alig confidence 



















































.........................


Template Conservation            
       
 
 





 
 

  

  
   
  
     .........................   
Template Sequence  LYREQQKQRLWQSHPYQGLKGRTLLILGTGSIGQHIAHTGKHFGMKVLGVSR. . . . . . . . . . . . . . . . . . . . . . . . . SGR
Template Known Secondary structure  TT








STT


STT

S.........................S

Template Predicted Secondary structure 






















.........................


Template SS confidence 















































































   120.........130.........140.........150.........160.........170. ...
 
   373......380.........390.........400.........410.........420.........430.....
Predicted Secondary structure 

























Query SS confidence 






























































Query Sequence  KLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPISE
Query Conservation          
        
  







 
 
  
  
   
        








 
  
Alig confidence 






























































Template Conservation               
 


  



    


  
  

    
  

 

 






  


Template Sequence  ERAGFDQVYQLPALNKMLAQADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINE
Template Known Secondary structure 

TT
S
GGGT
S




SSSTTSB
TTTTT
S
TT

S
GGGB
Template Predicted Secondary structure 


































Template SS confidence 






























































   175....180.........190.........200.........210.........220.........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions