Job Description P21177 Confidence 100.00% Date Thu Jan 5 11:37:58 GMT 2012 Rank 72 Aligned Residues 221 % Identity 24% Template c3h02F_ PDB info PDB header:lyase Chain: F: PDB Molecule:naphthoate synthase; PDBTitle: 2.15 angstrom resolution crystal structure of naphthoate synthase from2 salmonella typhimurium. Resolution 2.15 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		M	L	Y	K	G	D	T	L	Y	L	D	W	L	E	D	G	I	A	E	L	V	F	D	A	P	G	S	V	N	K	L	D	T	A	T	V	A	S	L	G	E	A	I	G	V	L	E	Q	Q	S	D	L	K	G	L	L	L	R	S	N	K	.	A	A	F	I	V	G	A	D	I	T	E	F	L	S	L	F	L	V
Query Conservation																																																															.
Alig confidence						.	.																																																								.													.	.	.	.	.	.
Template Conservation						.	.																																																																					.	.	.	.	.	.
Template Sequence		E	G	Y	T	.	.	D	I	R	Y	E	K	S	T	D	G	I	A	K	I	T	I	N	R	P	Q	V	R	N	A	F	R	P	L	T	V	K	E	X	I	Q	A	L	A	D	A	R	Y	D	D	N	V	G	V	I	I	L	T	G	E	G	D	K	A	F	C	A	G	G	D	H	L	N	V	.	.	.	.	.	.
Template Known Secondary structure		T	T		S	.	.	S							T	T	S									G	G	G	T	T		B																			T	T									S	S	S	S						B				T		.	.	.	.	.	.
Template Predicted Secondary structure						.	.																																																																					.	.	.	.	.	.
Template SS confidence
		20	.	.	.			.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	E	Q	L	S	Q	W	L	H	F	A	N	S	V	F	N	R	L	E	D	L	P	V	P	T	I	A	A	V	N	G	Y	A	L	G	G	G	C	E	C	V	L	A	T	D	Y	R	L	A	T	P	D	L	R	I	G	L	P	E	T	K	L	G	I	M	P	G	F	G	G	S	V	R	M	P	R	M	L	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	L	D	F	Q	R	Q	I	R	T	C	P	K	P	V	V	A	X	V	A	G	Y	S	I	G	G	G	H	V	L	H	X	X	C	D	L	T	I	A	A	E	N	A	I	F	G	Q	T	G	P	K	V	G	S	F	D	G	G	W	G	A	S	Y	X	A	R	I	V	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.											S	S								S				T									S	S						T	T											T					S	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	S	A	L	E	I	I	A	A	G	K	D	V	G	A	D	Q	A	L	K	I	G	L	V	D	G	V	V	K	A	E	K	L	V	E	G	A	K	A	V	L	R	Q	A	I	N	G	D	L	D	W	K	A	K	R	Q	P	K	L	E	P	L	K	L	S	K	I	E	A	T	M	S	F	T	I	A	K	G	M
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	K	K	A	R	E	I	W	F	L	C	R	Q	Y	D	A	Q	Q	A	L	D	X	G	L	V	N	T	V	V	P	L	A	D	L	E	K	E	T	V	R	W	C	R	E	X	L	Q	N	S	P	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T	T	S	S	S					G	G	G														T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	Q	T	A	G	K	H	Y	P	A	P	I	T	A	V	K	T	I	E	A	A	A	R	F	G	R	E	E	A	L	N	L	E	N	K	S	F	V	P	L	A	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	A	L	R	C	L	K	A	A	L	N	A	D	C	.	.	D	G	Q	A	G	L	Q	E	L	A	G	N	A	T	X	L	F	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.												T	T	.	.	S																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
												228	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions