Job Description P21177 Confidence 97.13% Date Thu Jan 5 11:37:58 GMT 2012 Rank 344 Aligned Residues 142 % Identity 15% Template c3gvxA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerate dehydrogenase related protein; PDBTitle: crystal structure of glycerate dehydrogenase related2 protein from thermoplasma acidophilum Resolution 2.20 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D	R	V
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	L	G	I	L	G	Y	G	G	I	G	R	R	V	A	H	L	A	K	A	F	G	X	R	V	I	A	Y	T	R	S	S	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	N	V	D	V	I	S	E	S	P	A	D	L	F	R	Q	S
Template Known Secondary structure										S														T								S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		S				S	S
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.																													.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.		.	.	.	.	.	.	.	.	450	.	.						.	.	.	.	.	.	.	460	.	.	.	.	.
Predicted Secondary structure																																					.	.														.												.	.	.	.	.
Query SS confidence																																					.	.														.												.	.	.	.	.
Query Sequence		D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	.	.	S	T	I	P	I	S	E	L	A	N	A	L	E	.	R	P	E	N	F	C	G	M	H	F	F	.	.	.	.	.	N	P	V	H	R	M	P	L	V	E	I	I	R
Query Conservation																																					.	.														.												.	.	.	.	.
Alig confidence																																					.	.														.												.	.	.	.	.
Template Conservation
Template Sequence		D	F	V	L	I	A	I	P	L	T	D	K	T	R	G	X	V	N	S	R	L	L	A	N	A	R	K	N	L	T	I	V	N	V	A	R	A	D	V	V	S	K	P	D	X	I	G	F	L	K	E	R	S	D	V	W	Y	L	S	D	V	W	W	N	E	P	E	I	T	E	T	N	L	R	N	A	I	L	S	P
Template Known Secondary structure		S										T	T	T	T	T		B	S					T	T			T	T							S		G	G	G	B													T	T						S			T	T	T	T	S			S				S	S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		466	.	.			.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		G	E	K	.	.	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		H	V	A	G	G	X	S	G	E	I	X	D	I	A	I	Q	L	A	F	E
Template Known Secondary structure		S		S	S		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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