Job Description P21177 Confidence 99.53% Date Thu Jan 5 11:37:58 GMT 2012 Rank 122 Aligned Residues 255 % Identity 14% Template c3g0oA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium Resolution 1.80 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	.	A	G	F	D	R	V
Query Conservation																																																																											.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	G	I	V	G	L	G	S	X	G	X	G	A	A	R	S	C	L	R	A	G	L	S	T	W	G	A	D	L	N	P	Q	A	C	A	N	L	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	A	C	G	A	A	A	S	A	R	E	F	A	G	V	V
Template Known Secondary structure									S													T	T								S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		S				S	S	S	T	T	T	T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.																								.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.				.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470
Predicted Secondary structure																																														.	.	.
Query SS confidence																																														.	.	.
Query Sequence		D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	.	.	.	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V	E	I	I	R	G	E	K	S	S
Query Conservation																																														.	.	.
Alig confidence																																														.	.	.
Template Conservation
Template Sequence		D	A	L	V	I	L	V	V	N	A	A	Q	V	R	Q	V	L	F	D	G	V	A	H	L	X	K	P	G	S	A	V	X	V	S	S	T	I	S	S	A	D	A	Q	E	I	A	A	A	L	T	A	L	N	L	N	X	L	D	A	P	V	S	G	G	A	V	K	A	A	Q	G	E	X	T	V	X	A	S	G	S
Template Known Secondary structure		S							S	S													G	G	G	S		T	T							S																T	T	T										S							T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		471	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.										.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																						.
Query SS confidence																											.	.	.	.	.	.	.	.	.																						.
Query Sequence		D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	.	.	.	.	.	.	.	.	.	G	F	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	.	G	A	D	F	R	K	I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P	A	Y	L
Query Conservation																											.	.	.	.	.	.	.	.	.																						.
Alig confidence																											.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		E	A	A	F	T	R	L	K	P	V	L	D	A	V	A	S	N	V	Y	R	I	S	D	T	P	G	A	G	S	T	V	K	I	I	H	Q	L	L	A	G	V	H	I	A	A	A	A	E	A	X	A	L	A	A	R	A	G	I	P	L	D	V	X	Y	D	V	V	T	H	A	A	G	N	S	W	X	F	E	N	R
Template Known Secondary structure																								S	S	T	T																														T	T											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		541	.	.	.										.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.
Query Sequence		L	D	V	V	.	.	.	.	.	.	.	.	.	G	I	D	T	A	H	H	A	Q	A	V	M	A	A	G	F	P	Q	R	M	Q	K	D	Y	R	D	A	I	D	A	L	F	D	A	N	R	F	G	Q	K	N	G	L	G	F	W	R	Y	K	E
Query Conservation						.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.																						.	.
Template Conservation																																				.	.
Template Sequence		X	Q	H	V	V	D	G	D	Y	T	P	R	S	A	V	D	I	F	V	K	D	L	G	L	V	A	D	T	A	K	A	L	R	F	.	.	P	L	P	L	A	S	T	A	L	N	X	F	T	S	A	S	N	A	G	Y	G	K	E	D	D	S	A
Template Known Secondary structure							T	T					S	S	B																		T	T		.	.																		T	T	T	T	T	S	B	G	G	G
Template Predicted Secondary structure																																				.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions