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Job DescriptionP21177
Confidence100.00%DateThu Jan 5 11:37:58 GMT 2012
Rank3Aligned Residues673
% Identity30%Templatec2wtbA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:fatty acid multifunctional protein (atmfp2); PDBTitle: arabidopsis thaliana multifuctional protein, mfp2
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  GDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQL
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Template Sequence  GKTV. MEVGGDGVAVITLINP. PVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGGFDIEPKAG. . . . . . . . .
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TTS
T.TTT


TT
TT

SSS

B
SS



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   7..10 .........20...... ...30.........40.........50.........60.........70.....
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  SQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSAL
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Template Sequence  . . . YISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKAL
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TSSS

STSS
TT


GGGGT



SS
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   88.90.........100.........110.........120.........130.........140.........150.........160....
 
   165....170.........180.........190.........200.........210.........220.........230.........240....
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Query Sequence  EIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMVAQTA
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Template Sequence  EMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQT. . . LKR
Template Known Secondary structure 


TS
S

TTTTTSS



GGG

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   165....170.........180.........190.........200.........210.........220.........230........ .240.
 
   245....250.........260.........270.........280.........290.........300.... .....310.........320..
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Query Sequence  GKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAK. . KLTKDVETPKQAAVLGAG
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Template Sequence  APNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGG
Template Known Secondary structure 
TT

S
TT
GGG

TTTSSS










S
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   323......330.........340.........350.........360.........370.........380.........390.........400..
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Query Sequence  IMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVE
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Template Sequence  LMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVR. . . . SQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIE
Template Known Secondary structure  TTT


SSTT
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TTTTTSSSSGGGTT
S


S
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   322.......330.........340.........350.........360.... .....370.........380.........390.......
 
   403......410.........420.........430.........440.........450.........460.........470.........480..
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Query Sequence  NPKVKKAVLAETEQKVRQDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWAS
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Template Sequence  NISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGK
Template Known Secondary structure 
S
TT


SSS
TTT
S
TTT
SSTTT


SS

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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   483......490.........500.........510.........520.........530.........540.........550.........560..
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Query Sequence  KMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQ
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Template Sequence  KIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAIS. KFGMPMGPFRLCDLVGFGVAIATATQFIENFSE
Template Known Secondary structure  TT
SSTTTTTT

.T
SS

SGG
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   482.......490.........500.........510.........520....... ..530.........540.........550.........560
 
   563......570.........580.........590.........600.........610.........620.........630.........640..
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Query Sequence  RMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVEDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRC
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Template Sequence  RTYKS. . MIIPLMQEDKDPELKKYIEKARSISGVKLDP. . . . . . . . . . . . . . . . . KLANLSEKDIIEMTFFPVVNEACRV
Template Known Secondary structure  G



..TTT





TTST

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   561.... ....570.........580.........590...... ...600.........610.........620.
 
   643......650.........660.........670.........680.........690.. .......700.........710........
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Query Sequence  LEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQH. LGPLYEVPEGLRNKARHNEPYYPPVE
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Template Sequence  FAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVK
Template Known Secondary structure  TTSSS



GGG



GGG


T

SSS


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   643......650.........660.........670.........680.........690.........700.........710.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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