Job Description P21177 Confidence 98.28% Date Thu Jan 5 11:37:58 GMT 2012 Rank 249 Aligned Residues 121 % Identity 15% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D	R
Query Conservation																									.	.
Alig confidence																									.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	G	V	V	G	T	G	F	V	G	S	T	A	A	F	A	L	V	L	R	G	S	C	S	E	L	V	L	V	D	R	D	E	D	R	A	Q	A	E	A	E	D	I	A	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	V	S	H	G	T	R	V	W	H	G	G	H	S	E	L	A	D
Template Known Secondary structure									S														T			S							S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G									G	G	G	G	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		393	.	.	.	.	.										.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.
Query Sequence		V	D	I	V	V	E	.	.	.	.	.	.	.	.	.	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M
Query Conservation								.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Q	V	V	I	L	T	A	G	A	E	S	R	L	D	L	L	E	K	N	A	D	I	F	R	E	L	V	P	Q	I	T	R	A	A	P	D	A	V	L	L	V	T	S	N	P	V	D	L	L	T	D	L	A	T	Q	L	A	P	G	Q	P	V	I	G	S
Template Known Secondary structure			S																																		T	T	S						S	S	S													T	T	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions