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Job DescriptionP21177
Confidence98.87%DateThu Jan 5 11:37:58 GMT 2012
Rank195Aligned Residues122
% Identity20%Templatec2v65A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:l-lactate dehydrogenase a chain; PDBTitle: apo ldh from the psychrophile c. gunnari
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330....... ..340.........350.........360.........370.........380.........390.
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Query Sequence  KQAAVLGAGIMGGGIAYQSAWKGV. . PVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFD
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Template Sequence  SKVTVVGVGMVGMASAISILLKDLCDELAMVDVMEDKLKGEVMDLQHG. . . . . . . . . . . . . . SLFLKTKIVGDKDYSVTA
Template Known Secondary structure  S


STT

S
S
TT..............GGG

S
SSGGGGT
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   22.......30.........40.........50.........60......... 70.........80.......
 
   392..... ..400.........410.........420..... ....430.........440... ......
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Query Sequence  RVDIVV. . . . . . . . . . EAVVENPKVKKAVLAETEQKVRQDTVLA. SNTSTIPISELANALERP. ENFCGM
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Template Sequence  NSKVVVVTAGAGESRLNLVQRNVNIFKFIIPNIVKYSPNCILMVVSNPVDILTYVAWKLSGFPRHRVIGS
Template Known Secondary structure  T
S







TT

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GGG
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   90.........100.........110.........120.........130.........140.........150.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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