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Job DescriptionP21177
Confidence98.35%DateThu Jan 5 11:37:58 GMT 2012
Rank241Aligned Residues161
% Identity14%Templatec2rafC_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:putative dinucleotide-binding oxidoreductase; PDBTitle: crystal structure of putative dinucleotide-binding2 oxidoreductase (np_786167.1) from lactobacillus plantarum3 at 1.60 a resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   314.....320.........330.........340.........350.........360.........370.........380.........390...
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Query Sequence  KQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRV
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Template Sequence  XEITIFGKGNXGQAIGHNFEIAGHEVTYYGSKDQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ATTLG
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STTT

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S

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   1........10.........20.........30.... .....
 
   394.....400.........410.........420.........430.... .....440.........450.........
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Query Sequence  DIVVEAVVENPKVKKAVLAETEQKVRQDTVLASNTSTIPIS. . . . . . . . . . . . . . ELANALERPENFCGMHFFNPVHRMP
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Template Sequence  EIVIXAVPYP. . ALAALAKQYATQLKGKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLPDSQVLKAFNTTFAATLQS
Template Known Secondary structure  S
S
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B
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   40......... 50.........60.........70.........80.........90.........100.........110.......
 
   460.. .......470.........480.........490.........500.........510.......
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Query Sequence  LVE. . . . . . IIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDG
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Template Sequence  GQVNGKEPTTVLVAGNDDSAKQRFTRALADSPLEVKDAGKLKRARELEAXGFXQXTLAASEQIG
Template Known Secondary structure  STTT
S
TTTSS
SGGGTTSS
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   118.120.........130.........140.........150.........160.........170.........180.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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