Job Description P21177 Confidence 99.26% Date Thu Jan 5 11:37:58 GMT 2012 Rank 158 Aligned Residues 207 % Identity 17% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.					.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																											.	.																			.	.	.	.
Query SS confidence																											.	.																			.	.	.	.
Query Sequence		T	P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	.	.	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	.	.	.	.	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L
Query Conservation																											.	.																			.	.	.	.
Alig confidence																											.	.																			.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.
Template Sequence		K	V	S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	.	.	.	.	.	.	.	.	.	R	N	L	F	F	S	S
Template Known Secondary structure				S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	.	.	.	.	.	.	.	.	.	T	T					S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.										.	.	.	.	.	.	.
		386	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.														.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure				.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	Y	.	A	G	F	D	R	V	D	I	V	V	E	A	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F
Query Conservation				.															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.															.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																																																								.
Template Sequence		D	I	P	K	A	I	A	E	A	D	L	I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	.	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F
Template Known Secondary structure											S										B		S	S	S	T	T	T	T	T	S	B		T													S			S						.			S				T	T											T	T
Template Predicted Secondary structure																																																								.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		452				.	.	.	.	.	.	.			460	.	.								.	.	.	.	.	.	.	470	.				.	.	.	.	.	.	.	.	480	.	.	.		.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.									.	.	.
Predicted Secondary structure			.	.	.								.	.				.	.	.	.	.	.	.										.	.	.													.																						.	.	.	.	.	.	.	.
Query SS confidence			.	.	.								.	.				.	.	.	.	.	.	.										.	.	.													.																						.	.	.	.	.	.	.	.
Query Sequence		F	.	.	.	N	P	V	H	R	M	P	.	.	L	V	E	.	.	.	.	.	.	.	I	I	R	G	E	K	S	S	D	.	.	.	E	T	I	A	K	V	V	A	W	A	S	K	.	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	.	.	.	.	.	.	.	.	P	Y	F
Query Conservation			.	.	.								.	.				.	.	.	.	.	.	.										.	.	.													.																						.	.	.	.	.	.	.	.
Alig confidence			.	.	.								.	.				.	.	.	.	.	.	.										.	.	.													.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	L	S	N	P	E	F	L	A	E	G	T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S	I
Template Known Secondary structure												T	T								S		S								S	S																T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		508	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		A	G	F	S	Q	L	L	R	D	.	G	A	D	F	R	K	I	D	K	V	M	E
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		N	S	I	S	A	V	C	E	A	T	G	A	E	I	S	E	V	A	H	A	V	G
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions