Job Description P21177 Confidence 100.00% Date Thu Jan 5 11:37:58 GMT 2012 Rank 53 Aligned Residues 245 % Identity 19% Template c2fbmB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:y chromosome chromodomain protein 1, telomeric isoform b; PDBTitle: acetyltransferase domain of cdy1 Resolution 2.28 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		D	T	L	Y	L	D	W	L	E	D	G	I	A	E	L	V	F	D	A	P	G	S	V	N	K	L	D	T	A	T	V	A	S	L	G	E	A	I	G	V	L	E	Q	Q	S	D	L	K	G	L	L	L	R	S	N	K	A	A	F	I	V	G	A	D	I	T	E	F	.	L	S	L	F	L	V	P	E	E	Q	L
Query Conservation																																																																						.
Alig confidence																																															.																							.
Template Conservation																																															.
Template Sequence		R	D	I	V	V	K	K	E	D	G	F	T	Q	I	V	L	S	T	R	S	T	E	K	N	A	L	N	T	E	V	I	K	E	I	V	N	A	L	N	S	A	A	A	D	D	.	S	K	L	V	L	F	S	A	A	G	S	V	F	C	C	G	L	D	F	G	Y	F	V	K	H	L	R	N	N	R	N	T	A	S
Template Known Secondary structure			S							T	T									S	S	S	S	T	T		B																		S	S	.		S								S	S		S	B			B												S	T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	W	L	H	F	A	N	S	V	F	N	R	L	E	D	L	P	V	P	T	I	A	A	V	N	G	Y	A	L	G	G	G	C	E	C	V	L	A	T	D	Y	R	L	A	T	P	D	L	R	I	G	L	P	E	T	K	L	G	I	M	P	G	F	G	G	S	V	R	M	P	R	M	L	G	A	D	S	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	M	V	D	T	I	K	N	F	V	N	T	F	I	Q	F	K	K	P	I	V	V	S	V	N	G	P	A	I	G	L	G	A	S	I	L	P	L	C	D	L	V	W	A	N	E	K	A	W	F	Q	T	P	Y	T	T	F	G	Q	S	P	D	G	C	S	S	I	T	F	P	K	M	M	G	K	A	S	A	N
Template Known Secondary structure																				S								S				T					T	G	G	G	S	S						T	T											T					T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	I	A	A	G	K	D	V	G	A	D	Q	A	L	K	I	G	L	V	D	G	V	V	K	A	E	K	L	V	E	G	A	K	A	V	L	R	Q	A	I	N	G	D	L	D	W	K	A	K	R	Q	P	K	L	E	P	L	K	L	S	K	I	E	A	T	M	S	F	T	I	A	K	G	M	V	A	Q	T	A
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	L	I	A	G	R	K	L	T	A	R	E	A	C	A	K	G	L	V	S	Q	V	F	L	T	G	T	F	T	Q	E	V	M	I	Q	I	K	E	L	A	S	Y	N	P	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T												T	T	S	S	S					G	G	G														T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	H	Y	P	A	P	I	T	A	V	K	T	I	E	A	A	A	R	F	G	R	E	E	A	L	N	L	E	N	K	S	F	V	P	L	A	H	T	N	E	A	R	A	L	V
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	V	L	E	E	C	K	A	L	V	R	C	N	I	K	L	E	L	E	Q	A	N	E	R	E	C	E	V	L	R	K	I	W	S	S	A	Q	G	I	E	S	M
Template Known Secondary structure		.	.	.	.	.											T	T	T																					S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions