Job Description P21177 Confidence 98.64% Date Thu Jan 5 11:37:58 GMT 2012 Rank 220 Aligned Residues 122 % Identity 20% Template c2e37B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: structure of tt0471 protein from thermus thermophilus Resolution 2.30 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D
Query Conservation																										.	.
Alig confidence																										.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	K	V	G	I	V	G	S	G	X	V	G	S	A	T	A	Y	A	L	A	L	L	G	V	A	R	E	V	V	L	V	D	L	D	R	K	L	A	Q	A	H	A	E	D	I	L	H	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	F	A	H	P	V	W	V	R	A	G	S	Y	G	D	L	E
Template Known Secondary structure										S													T	T			S							S	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	S										G	G	G	G	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.															.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		392	.	.	.	.	.									.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440			.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.																																												.	.
Query SS confidence								.	.	.	.	.	.	.	.																																												.	.
Query Sequence		R	V	D	I	V	V	.	.	.	.	.	.	.	.	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	.	.	E	R	P	E	N	F	C	G	M
Query Conservation								.	.	.	.	.	.	.	.																																												.	.
Alig confidence								.	.	.	.	.	.	.	.																																												.	.
Template Conservation
Template Sequence		G	A	R	A	V	V	L	A	A	G	V	A	R	L	Q	L	L	D	R	N	A	Q	V	F	A	Q	V	V	P	R	V	L	E	A	A	P	E	A	V	L	L	V	A	T	N	P	V	D	V	X	T	Q	V	A	Y	R	L	S	G	L	P	P	G	R	V	V	G	S
Template Known Secondary structure		T		S							S																										T	T							S	S	S														S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions