Job Description P21177 Confidence 97.82% Date Thu Jan 5 11:37:58 GMT 2012 Rank 290 Aligned Residues 121 % Identity 17% Template c2dfdD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of human malate dehydrogenase type 2 Resolution 1.90 Å

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		314	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.		.
Predicted Secondary structure										.																	.	.																																																				.
Query SS confidence										.																	.	.																																																				.
Query Sequence		K	Q	A	A	V	L	G	A	.	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	.	G
Query Conservation										.																	.	.																																																				.
Alig confidence										.																	.	.										.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																						.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	V	A	V	L	G	A	S	G	G	I	G	Q	P	L	S	L	L	L	K	N	S	P	L	V	S	R	L	T	L	Y	D	I	A	H	.	T	P	G	V	A	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	H	I	E	T	K	A	A	V	K	G	Y	L	G	P	E	Q	L	P	D	C
Template Known Secondary structure								T	T	T	S	T	T												T	T									S	S	S	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	S	S	S								S	G	G	G
Template Predicted Secondary structure																																						.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.															50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		390	.	.	.	.	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.							.	.	440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Query Sequence		F	D	R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	.	.	.	.	.	.	N	A	L	E	R	P	E	N	F	C	G	M
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	G	C	D	V	V	V	I	P	A	G	V	P	R	K	P	G	M	T	R	D	D	L	F	N	T	N	A	T	I	V	A	T	L	T	A	A	C	A	Q	H	C	P	E	A	M	I	C	V	I	A	N	P	V	N	S	T	I	P	I	T	A	E	V	F	K	K	H	G	V	Y	N	P	N	K	I	F	G	V
Template Known Secondary structure			T	T		S							S					T	T			G	G	G	G																				T	T	S						S	S																T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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