Job Description P21177 Confidence 98.78% Date Thu Jan 5 11:37:58 GMT 2012 Rank 207 Aligned Residues 254 % Identity 13% Template c1yj8C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: initial structural analysis of plasmodium falciparum glycerol-3-2 phosphate dehydrogenase Resolution 2.85 Å

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		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.										340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	.	.	.	.	.	.	.	.	.	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L
Query Conservation																											.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	S	I	L	G	S	G	N	W	A	S	A	I	S	K	V	V	G	T	N	A	K	N	N	Y	L	F	E	N	E	V	R	M	W	I	R	D	E	F	E	R	M	V	D	I	I	N	N	.	.	.	.	.	.	.	.	.	.	K	H	E	N	T	K	Y	L	K	G	V	P	L	P	H	N	I	V	A	H	S
Template Known Secondary structure									S																		T	T	B		S								S												.	.	.	.	.	.	.	.	.	.			B		T	T	T	S	T	T		B			T	T					S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
		386	.		.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.		.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.			.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.
Predicted Secondary structure				.																															.																											.	.
Query SS confidence				.																															.																											.	.
Query Sequence		D	Y	.	A	G	F	D	R	V	D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	.	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	.	.	E	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V
Query Conservation				.																															.																											.	.
Alig confidence				.															.	.															.																											.	.
Template Conservation																			.	.
Template Sequence		D	L	A	S	V	I	N	D	A	D	L	L	I	F	I	V	P	.	.	C	Q	Y	L	E	S	V	L	A	S	I	K	E	I	K	I	A	S	H	A	K	A	I	S	L	T	K	G	F	I	V	K	K	N	Q	M	K	L	C	S	N	Y	I	S	D	F	L	N	I	P	C	S	A	L	S	G	A	N	I	A	M
Template Known Secondary structure		S	S					T	T		S								.	.												T						T	T									S					T	T													S	S	S								S
Template Predicted Secondary structure																			.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		462	.	.	.	.	.	.	.								470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.												520	.	.
Predicted Secondary structure										.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	I	I	R	G	E	K	S	.	.	.	.	.	.	.	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	G	.	A	D	.	.	.	.	.	.	.	.	.	.	.	F	R	K
Query Conservation										.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.																																																	.			.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	A	M	E	N	F	S	E	A	T	I	G	G	N	D	K	D	S	L	V	I	W	Q	R	V	F	D	L	P	Y	F	K	I	N	C	V	N	E	T	I	E	V	E	I	C	G	A	L	K	N	I	I	T	L	A	C	G	F	C	D	G	L	N	L	P	T	N	S	K	S	A	I	I	R	N	G	I	N	E
Template Known Secondary structure					T	T										S														B	T	T							S		S																							T	T
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.						.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		I	D	K	V	M	E	K	Q	F	G	W	P	M	G	P	A	Y	L	L	D	V	V	G	I	D	T	A	H	H	A	Q	.	.	.	.	.	A	V	M	A	A	G	F	P	Q	R	M	Q	K	D	Y	R	D	A	I	D	A	L	F	D	A	N	R	F
Query Conservation																																	.	.	.	.	.
Alig confidence								.																									.	.	.	.	.
Template Conservation								.
Template Sequence		M	I	L	F	G	K	.	V	F	F	Q	K	F	N	E	N	I	L	L	E	S	C	G	F	A	D	I	I	T	S	F	L	A	G	R	N	A	K	C	S	A	E	F	I	K	S	T	P	K	K	T	W	E	E	L	E	N	E	I	L	K	G	Q	K
Template Known Secondary structure								.			S	S				G	G	G	G	G	S	T	T	T										S	S	S	S										T	T	T	T										T	T	T	T
Template Predicted Secondary structure								.
Template SS confidence
		257	.	.	260	.	.		.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions