Job Description P21177 Confidence 97.99% Date Thu Jan 5 11:37:58 GMT 2012 Rank 273 Aligned Residues 117 % Identity 21% Template c1y6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: l-lactate dehydrogenase from clostridium thermocellum cth-1135 Resolution 3.01 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D
Query Conservation																										.	.
Alig confidence																										.	.									.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		S	K	V	A	I	I	G	A	G	F	V	G	A	S	A	A	F	T	M	A	L	R	Q	T	A	N	E	L	V	L	I	D	V	F	.	.	.	.	.	.	.	.	.	.	A	I	G	E	A	M	D	I	N	H	G	L	P	F	M	G	.	.	.	.	.	.	.	.	.	Q	M	S	L	Y	D	Y	S	D	V	K
Template Known Secondary structure										S													T	T		S	S									.	.	.	.	.	.	.	.	.	.									T	T	S				T	T	.	.	.	.	.	.	.	.	.							G	G	G	G	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.
		392	.	.	.	.	.	.	.									400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.			.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.																																											.	.
Query SS confidence										.	.	.	.	.	.	.	.																																											.	.
Query Sequence		R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	.	.	R	P	E	N	F	C	G	M
Query Conservation										.	.	.	.	.	.	.	.																																											.	.
Alig confidence										.	.	.	.	.	.	.	.																																											.	.
Template Conservation
Template Sequence		D	C	D	V	I	V	V	T	A	G	A	T	R	L	D	L	A	K	K	N	V	M	I	A	K	E	V	T	Q	N	I	M	K	Y	Y	N	H	G	V	I	L	V	V	S	N	P	V	D	I	I	T	Y	M	I	Q	K	W	S	G	L	P	V	G	K	V	I	G	S
Template Known Secondary structure		T		S																																		S							S	S	S													T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions