Job Description P21177 Confidence 97.83% Date Thu Jan 5 11:37:58 GMT 2012 Rank 289 Aligned Residues 123 % Identity 17% Template c1wziA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: structural basis for alteration of cofactor specificity of2 malate dehydrogenase from thermus flavus Resolution 2.00 Å

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		311	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.										.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure													.																	.	.	.	.	.	.	.	.	.
Query SS confidence													.																	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	P	K	Q	A	A	V	L	G	A	.	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	.	.	.	.	.	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T
Query Conservation													.																	.	.	.	.	.	.	.	.	.
Alig confidence													.																	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	A	P	V	R	V	A	V	T	G	A	A	G	Q	I	G	Y	S	L	L	F	R	I	A	A	G	E	M	L	G	K	D	Q	P	V	I	L	Q	L	L	G	S	E	R	S	F	Q	A	L	E	G	V	V	M	E	L	E	D	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	P	L	L	A	G
Template Known Secondary structure										S	S	T	T	S												T	T	T	T	T		T	T											T	T	T													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.															60	.	.	.	.	.	.
		381	.	.	.	.	.	.		.	.	390	.	.	.	.	.	.	.	.	.	400															.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
Predicted Secondary structure									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query SS confidence									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Query Sequence		I	H	P	T	L	D	Y	.	A	G	F	D	R	V	D	I	V	V	E	A	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	.	.	.	.	.
Query Conservation									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Alig confidence									.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.										.	.	.	.	.
Template Conservation																																																																		.	.
Template Sequence		L	E	A	T	D	D	P	K	V	A	F	K	D	A	D	Y	A	L	L	V	G	A	A	P	R	K	A	G	M	E	R	R	D	L	L	Q	V	N	G	K	I	F	T	E	Q	G	R	A	L	A	E	V	A	K	K	D	V	K	V	L	V	V	G	N	.	.	P	A	N	T	N	A	L	I	A	Y	K	N	A	P
Template Known Secondary structure						S						T	T	T		S												S	S																									S		T	T							S	S	.	.	S											T		T
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.
		441	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	P	E	N	F	C	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	L	N	P	R	N	F	T	A
Template Known Secondary structure		T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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