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Job DescriptionP21177
Confidence99.08%DateThu Jan 5 11:37:58 GMT 2012
Rank172Aligned Residues190
% Identity13%Templatec1txgA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: structure of glycerol-3-phosphate dehydrogenase from archaeoglobus2 fulgidus
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   315....320.........330.........340.........350.........360.........370.........380....... ..390...
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Query Sequence  QAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDY. AGFDRV
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Template Sequence  IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFD. . . . . . . . . TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENA
Template Known Secondary structure  S





GGG.........TT

BTTTTB


S
GGGTT
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   2.......10.........20.........30.... .....40.........50.........60.........70..
 
   394.....400.........410.........420....... ..430.........440.........450.........460..
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Query Sequence  DIVVEAVVENPKVKKAVLAETEQKVRQDTVLASN. . . . . . . TSTIPISELANALERPENFCGMHFFNPVHRMPLVE. . . .
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Template Sequence  EVVLLGVS. . TDGVLPVMSRILPYLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREVAKRMPT
Template Known Secondary structure  S
S
..GGGTTT

S



STTTTSTT
GGGSS

TT

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   73......80 .........90.........100.........110.........120.........130.........140.........150
 
   463......470.........480.........490.........500.........510.....
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Query Sequence  IIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLR
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Template Sequence  TVVFSSPSESSANKMKEIFETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIR
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BTTS
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   151........160.........170.........180.........190.........200...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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