Job Description P21177 Confidence 100.00% Date Thu Jan 5 11:37:58 GMT 2012 Rank 77 Aligned Residues 222 % Identity 22% Template c1rjnC_ PDB info PDB header:lyase Chain: C: PDB Molecule:menb; PDBTitle: the crystal structure of menb (rv0548c) from mycobacterium2 tuberculosis in complex with the coa portion of naphthoyl coa Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	G	D	T	L	Y	L	D	W	L	E	D	G	I	A	E	L	V	F	D	A	P	G	S	V	N	K	L	D	T	A	T	V	A	S	L	G	E	A	I	G	V	L	E	Q	Q	S	D	L	K	G	L	L	L	R	S	N	K	A	A	F	I	V	G	A	D	I	T	E	F	L	S	L	F	L	V	P	E	E
Query Conservation
Alig confidence										.																																																																				.	.	.	.
Template Conservation										.																																																																				.	.	.	.
Template Sequence		L	T	D	I	T	Y	H	R	.	H	V	D	D	A	T	V	R	V	A	F	N	R	P	E	V	R	N	A	F	R	P	H	T	V	D	E	L	Y	R	V	L	D	H	A	R	M	S	P	D	V	G	V	V	L	L	T	G	N	G	P	S	P	K	D	G	G	W	A	F	C	S	G	G	D	L	H	.	.	.	.
Template Known Secondary structure			S	S						.		S	S	S	S									G	G	G	T	T		B																	T		T	T													T	T	T									B				.	.	.	.
Template Predicted Secondary structure										.																																																																				.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		Q	L	S	Q	W	L	H	F	A	N	S	V	F	N	R	L	E	D	L	P	V	P	T	I	A	A	V	N	G	Y	A	L	G	G	G	C	E	C	V	L	A	T	D	Y	R	L	A	T	.	P	D	L	R	I	G	L	P	E	T	K	L	G	I	M	P	G	F	G	G	S	V	R	M	P	R	M	L	G	A	D
Query Conservation																																																		.
Alig confidence		.	.	.	.	.	.	.	.																																									.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	I	L	E	V	Q	R	L	I	R	F	M	P	K	V	V	I	C	L	V	N	G	W	A	A	G	G	G	H	S	L	H	V	V	C	D	L	T	L	A	S	R	E	Y	A	R	F	K	Q	T	D	A	D	V	G	S	F	D	G	G	Y	G	S	A	Y	L	A	R	Q	V	G	Q	K
Template Known Secondary structure		.	.	.	.	.	.	.	.											S	S	S								S				T									S	S						T	T	T							G	G	G	S	S				T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	L	E	I	I	A	A	G	K	D	V	G	A	D	Q	A	L	K	I	G	L	V	D	G	V	V	K	A	E	K	L	V	E	G	A	K	A	V	L	R	Q	A	I	N	G	D	L	D	W	K	A	K	R	Q	P	K	L	E	P	L	K	L	S	K	I	E	A	T	M	S	F	T	I	A	K	G	M	V	A
Query Conservation
Alig confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	R	E	I	F	F	L	G	R	T	Y	T	A	E	Q	M	H	Q	M	G	A	V	N	A	V	A	E	H	A	E	L	E	T	V	G	L	Q	W	A	A	E	I	N	A	K	S	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																						T	S		S					G	G	G														T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	A	G	K	H	Y	P	A	P	I	T	A	V	K	T	I	E	A	A	A	R	F	G	R	E	E	A	L	N	L	E	N	K	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	Q	R	M	L	K	F	A	F	N	L	L	D	D	G	L	V	G	Q	Q	L	F	A	G	E	A	T
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	T	T	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions