Job Description P21177 Confidence 98.78% Date Thu Jan 5 11:37:58 GMT 2012 Rank 208 Aligned Residues 196 % Identity 14% Template c1pgqA_ PDB info PDB header:oxidoreductase (choh(d)-nadp+(a)) Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase; PDBTitle: crystallographic study of coenzyme, coenzyme analogue and substrate2 binding in 6-phosphogluconate dehydrogenase: implications for nadp3 specificity and the enzyme mechanism Resolution 3.17 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D	R	V
Query Conservation
Alig confidence																																											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		A	D	I	A	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	M	N	D	H	G	F	V	V	C	A	F	N	R	T	V	S	K	V	D	D	F	L	A	.	.	.	.	.	.	.	N	E	A	K	G	T	K	V	L	G	A	H	S	L	E	E	M	V	.	.	.	.	.	.	.	.	S	K	L	K	K	P
Template Known Secondary structure		B	S							S													T	T								S	S	T									.	.	.	.	.	.	.	T	T	T	T	T	S	S					S	S						.	.	.	.	.	.	.	.			B		S	S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.								.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.		.	.	.	.	.	.	460						.	.	.	.	.	.	.
Predicted Secondary structure																																																														.								.	.	.	.	.
Query SS confidence																																																														.								.	.	.	.	.
Query Sequence		D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	.	P	V	H	R	M	P	L	.	.	.	.	.	V	E	I	I	R	G	E
Query Conservation																																																														.								.	.	.	.	.
Alig confidence																.																																						.	.							.								.	.	.	.	.
Template Conservation																.																																						.	.
Template Sequence		R	R	I	I	L	L	V	K	A	G	Q	A	V	D	.	N	F	I	E	K	L	V	P	L	L	D	I	G	D	I	I	I	D	G	G	N	S	E	Y	R	D	T	M	R	R	C	R	D	L	K	D	K	.	.	G	I	L	F	V	G	S	G	V	S	G	G	E	D	G	A	R	Y	G	P	S	L	M	P	G	G
Template Known Secondary structure									S		S					.							T	T	T			T	T							S																	T	.	.	T										S
Template Predicted Secondary structure																.																																						.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		468	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.													500	.	.				.	.	.	.	.	.	.	510	.	.	.	.	.	.			.	.	.	520	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.															.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.															.	.
Query Sequence		K	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	T	P	I	V	V	N	D	C	P	G	F	F	V	.	.	.	.	.	.	.	.	.	.	.	.	N	R	V	.	.	.	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	.	.	G	A	D	F	R	K	I	D	K	V	M	E	K
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.				.	.	.															.	.
Alig confidence		.	.																															.	.	.	.	.	.	.	.	.	.	.	.				.	.	.															.	.
Template Conservation		.	.
Template Sequence		.	.	N	K	E	A	W	P	H	I	K	A	I	F	Q	G	I	A	A	K	V	G	T	G	E	P	C	C	D	W	V	G	D	D	G	A	G	H	F	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	H	L	M	K	D	V	L	G	L	G	H	K	E	M	A	K	A	F	E	E
Template Known Secondary structure		.	.		T	T	T												S				T	T	T			S							T	T																														T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions