Job Description P21177 Confidence 99.40% Date Thu Jan 5 11:37:58 GMT 2012 Rank 144 Aligned Residues 207 % Identity 16% Template c1m67A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of leishmania mexicana gpdh complexed with inhibitor2 2-bromo-6-hydroxy-purine Resolution 2.50 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390	.
Predicted Secondary structure																																																																													.
Query SS confidence																																																																													.
Query Sequence		P	K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	.	A	G	F	D
Query Conservation																																																																													.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.																							.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	N	K	A	V	V	F	G	S	G	A	F	G	T	A	L	A	M	V	L	S	K	K	C	R	E	V	C	V	W	H	M	N	E	E	E	V	R	L	V	N	E	K	.	.	.	.	.	.	.	.	.	.	R	E	N	V	L	F	L	K	G	V	Q	L	A	S	N	I	T	F	T	S	D	V	E	K	A	Y	N
Template Known Secondary structure											S												T	T									S												.	.	.	.	.	.	.	.	.	.	T	S		T	T	T	S	T	T					T	T					S							T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.											.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.						.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.
Query SS confidence																													.	.	.	.	.
Query Sequence		R	V	D	I	V	V	E	A	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	.	.	.	.	.	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	P	E	N	F	C	G	M	H	F	F	N	P	V	H	R	M	P	L	V	E	I	I	R	G
Query Conservation																													.	.	.	.	.
Alig confidence												.	.																.	.	.	.	.
Template Conservation												.	.
Template Sequence		G	A	E	I	I	L	F	V	I	P	.	.	T	Q	F	L	R	G	F	F	E	K	S	G	G	N	L	I	A	Y	A	K	E	K	Q	V	P	V	L	V	C	T	K	G	I	E	R	S	T	L	K	F	P	A	E	I	I	G	E	F	L	P	S	P	L	L	S	V	L	A	G	P	S	F	A	I	E	V	A	T
Template Known Secondary structure		T		S	S							.	.																							T									S			T	T	T									T	T	T	S		G	G	G						S	S								T
Template Predicted Secondary structure												.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		467	.									.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.			.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure				.	.	.	.	.	.	.	.																			.	.																																.
Query SS confidence				.	.	.	.	.	.	.	.																			.	.																																.
Query Sequence		E	K	.	.	.	.	.	.	.	.	S	S	D	E	T	I	A	K	V	V	A	W	A	S	K	M	G	K	.	.	T	P	I	V	V	N	D	C	P	G	F	F	V	N	R	V	L	F	P	Y	F	A	G	F	S	Q	L	L	R	D	G	.	A	D	F	R	K	I	D	K	V	M	E	K	Q	F
Query Conservation				.	.	.	.	.	.	.	.																			.	.																																.
Alig confidence				.	.	.	.	.	.	.	.																			.	.																																.
Template Conservation
Template Sequence		G	V	F	T	C	V	S	I	A	S	A	D	I	N	V	A	R	R	L	Q	R	I	M	S	T	G	D	R	S	F	V	C	W	A	T	T	D	T	V	G	C	E	V	A	S	A	V	K	N	V	L	A	I	G	S	G	V	A	N	G	L	G	M	G	L	N	A	R	A	A	L	I	M	R	G	L
Template Known Secondary structure		T										S	S												S		T	T	S	S							S																									T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions