Job Description P21177 Confidence 98.60% Date Thu Jan 5 11:37:58 GMT 2012 Rank 222 Aligned Residues 120 % Identity 20% Template c1lldA_ PDB info PDB header:oxidoreductase(choh (d)-nad (a)) Chain: A: PDB Molecule:l-lactate dehydrogenase; PDBTitle: molecular basis of allosteric activation of bacterial l-lactate2 dehydrogenase Resolution 2.00 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		K	Q	A	A	V	L	G	A	G	I	M	G	G	G	I	A	Y	Q	S	A	W	K	G	V	.	.	P	V	V	M	K	D	I	N	D	K	S	L	T	L	G	M	T	E	A	A	K	L	L	N	K	Q	L	E	R	G	K	I	D	G	L	K	L	A	G	V	I	S	T	I	H	P	T	L	D	Y	A	G	F	D
Query Conservation																										.	.
Alig confidence																										.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	K	L	A	V	I	G	A	G	A	V	G	S	T	L	A	F	A	A	A	Q	R	G	I	A	R	E	I	V	L	E	D	I	A	K	E	R	V	E	A	E	V	L	D	M	Q	H	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	Y	P	T	V	S	I	D	G	S	D	D	P	E	I	C	R
Template Known Secondary structure										S													T	T			S							S	S														T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	S	T	T							S		G	G	G	G	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.														.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		392	.	.	.	.	.	.	.															400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.						.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Query Sequence		R	V	D	I	V	V	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	E	N	P	K	V	K	K	A	V	L	A	E	T	E	Q	K	V	R	Q	D	T	V	L	A	S	N	T	S	T	I	P	I	S	E	L	A	N	A	L	E	R	.	.	.	.	.	P	E	N	F	C	G	M
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.											.	.												.	.	.	.	.
Template Conservation																																											.											.	.
Template Sequence		D	A	D	M	V	V	I	T	A	G	P	R	Q	K	P	G	Q	S	R	L	E	L	V	G	A	T	V	N	I	L	K	A	I	M	P	N	L	V	K	V	A	.	P	N	A	I	Y	M	L	I	T	N	.	.	P	V	D	I	A	T	H	V	A	Q	K	L	T	G	L	P	E	N	Q	I	F	G	S
Template Known Secondary structure		T		S												T	T																										.	T	T	S							S	.	.	S													T			T	T	S
Template Predicted Secondary structure																																											.											.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.			.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions